Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00825 ATGAAATTATATGATGTCTCTAAAAGATTTGAGGGCTTGTATGAGCTAAAGTTTGTGCGCACCTTTCTACCACAGTCCCCATATGTATATTATCATTACTTAACCAAAAGGGTATCACATGGTTGGCTTCCTAAACTAAGATGTTTGCGAACACTGTCATTGTCAACATACAGAAATATCACTGAGTTGCCTGATTCAATTGGAAATTTGGTGCTTTTGCGGTATCTTGACCTTTCCTCTACTTCCATCAAAAGACTACCTGATGCAACCTTTACACTTTACAATTTGCAAACTCTGAAATTAGCAAATTGTAAATTTCTTATGCAGCTTTCAGGACAGATAGCAAATTTGGTCAATCTACGCCACCTAGATATTAGGGACACAAATTTGAATGAGATACCAAAACAAATATGCAAACTACAAGATCTTCGTACATTGACTTCCTTTGTTGTAGGAAGGGAAGACGGATTAAGGATCAAAGAATTAGGAAAATTTCTTTTTCTACAAGGTAACCTTTCCATTTTGAAGCTACAAAATGTTGTTAATCCCATGGATGCATTTCAAGCCAACATGAAGAAAAAAAAGCAGATTGAGGAGCTTACACTGAAGTGGGGAGAAGATCCACAAGATTCACAAATTGAGAAAGATGTATTTGAGAACCTACAACCATCAACAAATCTAAAGAAACTCACCATCAGATACTATAGTGGCACAAGCTTTCCGAAATGGTTAAGTGAGTCTTCGTATTCGAATGTTATAGTCCTTCGTATCAGTGACTGCAACTATTGCTTGTCACTTCCACCATTTGGACAATTACCTTCACTTAAGGAGCTTGTGATTCAAAGGATGGAAATGGTGAAGACAGTTGATGAAGAATTCTATAGCAACAATGAAAGATCCTCTTTATTTCAGCCATTTCCAATGTTGGAGAGTCTCCAGTTTGAAGAGATGTTAGAATGGGAGGAGTGGCTACCATTTAAAGGTGAAAATAGCGAATTTCCTTTTCCTTTGCTGAAGCATTTGAGTTTATCCGAATGTCCGAAGTTGAGAGGAAACTTGCCCAACCATCTGCCTTCATTAAAAGAGGTTAGTATCTCAAAGTGCAACCAATTAGAGGCAAAATCATGTGATCTACACTGGAACACATCAATTGAATCTTTAAGAATTAGTGAAGGGGGAAAAGGCTTGTTGTCTCTTCTTGACGAATTTTCGTATGAGAAGCTAAATATTTTCAAATGGGATAGCTTGTCGTGTTTGCCAAGAATGATACTAGGTGCCAATTGTCTTCAATGGTTGACTCTTAAGAGGATCCCCTCTTTGATTTCCTTCCCAAATGATGGTTTGCCCACGTCATTGAAATCACTTGAGATTAATTATTGTGAGAACTTAGAATTTTTATCTCATGAAACGTGGCACAAATACACATCACTTGAATCTCTGGAAATTAGGCATAGTTGTCATTCTCTTACGTCCATTACATTAGATTGTTTCCCTGCTCTTGAACGTCTAAGCATCATCTCGTGTCCCAACTTGGAAGCAATTACTACTCAAGGTGGAGGGCCTGCTCCCAAATTAATAAATTTTAAGGTCCGTGATTGTGAGAAACTTAGGTCACTTCCAGAACTGATTGATCTCCCTTCCCTTAAATACTCAAGTCTCTCTAAGCTTGCAGTGGTAGCATCATTTGGTGCAAGGTTTTTTCCTTCAAGTTTACAATCACTGACGGTTAATGTTGGAATGTTATCATGTATGTCTAAAGATGAGTTAGGTTTCATATTCCCACGACTCACTTCTCTGTCTCATCTTCGTATTGAGGGTGGTGGGGAGGCAGATGTTGTTAACATCATGCTGAAGGAGCCGTTACTGCCCACTTCTCTTCAAGGGTTGTACCTTCAGTGGCTTGATGGTTTGAAGTGTTTGGGAATGGAAGGAAAAGGGCTTCAACATCTCACATCTCTCCAGTCTCTCTCCCTATGGGGTTTAGATGAATTGAAGTCGTGGGAAGGGAATGGGCTTCAACATCTCACTTCTCTTCGATACCTTGAGATCGGTTATTGTGGAAGCCTAGAGTCCTTGCCAGAAGATCACTTGCCATCCTCTTTTGAATTTTTGACTATAAGGAACTGTCCTTTACTAGAAGAAAGGTATCAAAATCAGAAAGGGAAATATTGGTCTAAGATTGCCCACATTCCTTCCATCTCGATAAAGGATGAAGTGATAATATGA 2226 0.3886 MKLYDVSKRFEGLYELKFVRTFLPQSPYVYYHYLTKRVSHGWLPKLRCLRTLSLSTYRNITELPDSIGNLVLLRYLDLSSTSIKRLPDATFTLYNLQTLKLANCKFLMQLSGQIANLVNLRHLDIRDTNLNEIPKQICKLQDLRTLTSFVVGREDGLRIKELGKFLFLQGNLSILKLQNVVNPMDAFQANMKKKKQIEELTLKWGEDPQDSQIEKDVFENLQPSTNLKKLTIRYYSGTSFPKWLSESSYSNVIVLRISDCNYCLSLPPFGQLPSLKELVIQRMEMVKTVDEEFYSNNERSSLFQPFPMLESLQFEEMLEWEEWLPFKGENSEFPFPLLKHLSLSECPKLRGNLPNHLPSLKEVSISKCNQLEAKSCDLHWNTSIESLRISEGGKGLLSLLDEFSYEKLNIFKWDSLSCLPRMILGANCLQWLTLKRIPSLISFPNDGLPTSLKSLEINYCENLEFLSHETWHKYTSLESLEIRHSCHSLTSITLDCFPALERLSIISCPNLEAITTQGGGPAPKLINFKVRDCEKLRSLPELIDLPSLKYSSLSKLAVVASFGARFFPSSLQSLTVNVGMLSCMSKDELGFIFPRLTSLSHLRIEGGGEADVVNIMLKEPLLPTSLQGLYLQWLDGLKCLGMEGKGLQHLTSLQSLSLWGLDELKSWEGNGLQHLTSLRYLEIGYCGSLESLPEDHLPSSFEFLTIRNCPLLEERYQNQKGKYWSKIAHIPSISIKDEVII 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00825 741 Pfam Leucine rich repeat 73 130 IPR001611 GO:0005515
Cca09g00825 741 SUPERFAMILY L domain-like 406 727 - -
Cca09g00825 741 PANTHER DISEASE RESISTANCE PROTEIN RP 40 391 IPR044974 GO:0006952
Cca09g00825 741 SUPERFAMILY L domain-like 28 390 - -
Cca09g00825 741 PANTHER OS05G0414200 PROTEIN 40 391 - -
Cca09g00825 741 Gene3D Ribonuclease Inhibitor 592 718 IPR032675 -
Cca09g00825 741 Gene3D Ribonuclease Inhibitor 407 580 IPR032675 -
Cca09g00825 741 Gene3D Ribonuclease Inhibitor 28 403 IPR032675 -
Cca09g00825 741 SMART LRR_typ_2 70 93 IPR003591 -
Cca09g00825 741 SMART LRR_typ_2 117 140 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00825 Cca-Chr9 24553622 24555847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00825 60 155 WRKY Transcription Factor Family AT4G12020 39.175 9.50e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00825 - - ccaj:109804933 1234.94