Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00812 ATGAATGCAAACCAAACGATCTTCTCTTCATACACGTTCATGTTTGCTGAACCTGGAAAGAGACATGAGATTTACAACGTTTGCATGGATCAGCCAATGAAGATAATTTCGAATGGCATTTGGACTCACCATCTTGGCGCAATCCCTTCACAATCTGCATTCACAATGCTTGAATTACAAATAGTTACCATTTTTGTCGTCACACAATGCTTCCATTTTATTCTCAAGCGATTAGGGTGCCCTTATTTTGTCTCACAAATAATGGCTGGTTTTCTTCTAGGGCCATCAATTCCCACAGGACCATTGGAAAAGTACAAGCAGATGTTGTTTCCATTCGGGAGTCCAGACATCCTAAACACGGTGTCATCGTTGGGGTTCTCGTTCTTCCTCTTCCTAACTTCGGTGCAAATGGACCTAACCTTGATCATGAAAACGGGGAAGAAGGCATGGGTCATCGCAGGGTGCTCCTATTTCGTTCCCATATTTGTTGGCTTTGTCACCATGGGATTGTCAATGGATACGTGGAATAAATTCGTTGGAGAGGACGCCTTCACCACCTTGCCCATGGTCCTCATATCCCAAAGCGGTTGTTCCTTCGCCGTCGTCTCAAACCTTCTCAACGACGTCGGAATCCTCAACTCCGAACTCGGACGCCTCGCACTCTCCGCAGCTTTTGTCAACGATCTCGCTGCTGGAATTGGGGCTGGATTTGCCACATCGTATGTTAGCAGCATGCATTTGAGTCCATCTACCCGTATTACAAACATGGTGGCATTTTTTGTTTATTTAATCTGCGTTCCACTAGTTTGCCGTCCAGCGATGAAGTGGGTTGTGAAGAACACCCCAGAAGGAAAATCCGTGGATAAGATATACATCTATGTGATCATTATAGTGTTGTTGGGATTGGCGTACGCTGCGGATTTTTTCCACTTGCCCTTCTTATCAGCAGCTGTTATGTTCGGTCTTTCTGTCCCCGAAGGTCCTCCTTTGGGGTCTCAATTGGTTTGCCAACTCGAGTTGTTCTCTACGTGGTTCCTCACCTCAATTTTCGTCACTTGTTGTGTCATGAAGGTGGATCTTACCGAATTTCACTCTATCAAATACGTTTTTGGCATATCCTTCTTCGTTGTACTCGTCTACGTGGTGAAGATGATATTGTGCATGGGAATTTCCCACTACTGTAACATGCCCTTCTCGGATGGCTTATGCCTTGCTCTCATTTTGACCTCCAAGGGTGTTGTCGATCTCTGCTCCTATACCCTAATCTACGACATCATGGCAGAGAATAAACAGTTGATATCTGTTATGGTGATCTCGGTGGTGATCCTAGGAACAGCTTCGGGCATTGGCGTGAAAGCAGCGTACGACCCTACAAGGAAATACGCAGGGTACCAAAAGAGGAACGTCATGAGCTTGAAGAACCACTCTGAGCTAAGGCTAGTGGCATGCGTACAAAAGCCATACCACACGAATGAGATCAAGAACGTGCTCCAGGTTTATTCTCCTATACCAGAGAACATACTAGTAGCGGATATTTTGCATCTCACAGAGCTAGTTGGAAGGTCCACACCCATTTTCATTGCACACAAACTTCAGCAGAAGCTAGGGTCTTCCTACAACTACTCTGGTGAACTCATTGTGGCCTTTGACCTATTCGAACGTGACTATGCTGGTTGCGCCACTGTCAACACCTACACAGCCATATCACCAGCGACACAAATGCATGAAGATGTTTGCTACCTTGCTTTGGACAAAAACGTATCACTCATCATTCTTCCATTTCATGTGAAATGGGGAGGGGATGGTTCCATAGAGTCAGAAGACATCAACATAAGGTCACTAAATTCCAAGGTTCTGGAAAAGGCACCATGCTCAGTTGGGATTCTAGTCAGCCGTGGCCTTTCTTGCTTCAAGTCAACGTTTTACAAAGTGGCCATGATTTTCTTGGGTGGACCTGATGATAGAGAAGCTTTGTGTTTGGCTAAGAGGTTTGCCAAAAACCTTGATAATACATTGTTTGTGTATAGATTGGAAGCAAATGATCGTAACATCACAGATTGGGAACACATGATTGATGATGAGGAGTTAAGGGAAGTGCGTGGAGCTTATGGTCAACTTGAAAATGTGACATATGTAGAGACAATCATAGATGATGCATCTCAAACAACGTGCATCATCAAAGATATAGCACGCAAGTTTGATTTTATTATAGTTGGGAGACGCTATGGGGTGAAAACTTCTCAGACTTTTGGGTTGGAAAATTGGACTGAATATTCGGAATTGGGAGTTATTGGTGATTTACTAGCTTCACAGGATACAGAGACTAAAGCTTCAATTTTGGTTGTTCAACAACAGTCAACAATGTCTGTTTCATCACAAAATTAG 2385 0.4403 MNANQTIFSSYTFMFAEPGKRHEIYNVCMDQPMKIISNGIWTHHLGAIPSQSAFTMLELQIVTIFVVTQCFHFILKRLGCPYFVSQIMAGFLLGPSIPTGPLEKYKQMLFPFGSPDILNTVSSLGFSFFLFLTSVQMDLTLIMKTGKKAWVIAGCSYFVPIFVGFVTMGLSMDTWNKFVGEDAFTTLPMVLISQSGCSFAVVSNLLNDVGILNSELGRLALSAAFVNDLAAGIGAGFATSYVSSMHLSPSTRITNMVAFFVYLICVPLVCRPAMKWVVKNTPEGKSVDKIYIYVIIIVLLGLAYAADFFHLPFLSAAVMFGLSVPEGPPLGSQLVCQLELFSTWFLTSIFVTCCVMKVDLTEFHSIKYVFGISFFVVLVYVVKMILCMGISHYCNMPFSDGLCLALILTSKGVVDLCSYTLIYDIMAENKQLISVMVISVVILGTASGIGVKAAYDPTRKYAGYQKRNVMSLKNHSELRLVACVQKPYHTNEIKNVLQVYSPIPENILVADILHLTELVGRSTPIFIAHKLQQKLGSSYNYSGELIVAFDLFERDYAGCATVNTYTAISPATQMHEDVCYLALDKNVSLIILPFHVKWGGDGSIESEDINIRSLNSKVLEKAPCSVGILVSRGLSCFKSTFYKVAMIFLGGPDDREALCLAKRFAKNLDNTLFVYRLEANDRNITDWEHMIDDEELREVRGAYGQLENVTYVETIIDDASQTTCIIKDIARKFDFIIVGRRYGVKTSQTFGLENWTEYSELGVIGDLLASQDTETKASILVVQQQSTMSVSSQN 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00812 794 Pfam Sodium/hydrogen exchanger family 64 451 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca09g00812 794 PANTHER CATION/H+ EXCHANGER 2 13 788 - -
Cca09g00812 794 Gene3D - 55 462 IPR038770 -
Cca09g00812 794 PANTHER CATION/H + ANTIPORTER 13 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00812 Cca-Chr9 24348315 24354564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00812 27 788 Antiporter Super Family AT3G44900 35.670 2.21e-143 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00812 - - gmx:100797272 1153.27