Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00811 ATGAATTCGAACGGAACAATCTTCTCTTCAGCCACGTTCATGTATGACATACCTAAAATGAGACAAGATGTCTACAACGTGTGCCTTGATCAGCCAATGACGATAATTTCTGATGGTATATGGTCTGGTCATAACCACATTGGATCAATTCCTTCAAAATCTGCGTTCACCATGCTTGAGCTGCAAATAGTTATCATTTTCGCCGTCACGCAGGGCTTTCATTTCTTTCTCAAGCGCATTGGGATCCCTTATTTCGTTTCACAAGTAATGGCTGGTTTTCTTCTAGGGCCATCAATTCCCACAGGACCATTGGAAAAGTACAAGCAGATGTTGTTCCCATTTGGGAGTCCAGACATCCTTAGCACAGTCTCAGCGATGGGGTACTCATTCTTCCTCTTCGTAAACTCAGTGAAAATGGACCTAAGTTTGATCACAAAAACAGGGAAGAAGGCTTGGGTCCTCGCACTCTCCTCCTATTTCATTCCCATATTTGTTGGCTATGTCTTCCGGAAAATCTTCTTTCAAGCCTTCTATGGCCTCCTCTCAGAGGATGTCTATAACTTGCCCGTCGTCTTCATTTCTAGCAGTGGTTGTTCCTTTGCTGTTGTTACAGTCTTGCTCAACGACCTCGGAATCCTCAACTCTGAACTCGGACGCCTTGCACTCTCCGCAACTTTTGTTAGCGACCTCTCAGGTGGAATCATGGCAGGAATTGGCACTGCCATTATAAGCGAGAGCAAAGGAGTAGGTTACCGTATTGAAAACGTGGCGGTTTTTCTTGCTTACTTAATCTTTGTTCCACTGATTGGGCGTCCAGCGATGATGTGGGTAGTGAAGAGAACCCCAGAAGGTAGATCCGTGAAGAAGGTATATATCTGCATCATCATAATGGTGGTCTGTGCATTGGGATACTTTGCACGGTTTTTCAGACAACCCTTCTTCGCAGCAGCTGTTATATTTGGCCTAGCTGTCCCTGAAGGTCCTCCTTTAGGGTCCGAATTGGTTAACCAACTTGAGTTATTCTCCACGTTTCTCTCCTCAATTTTTGTCACATGTTGTATCATGAAGGTGGATCTTACTCAATGCGACTCTCTCACCCTCTTTCTCGTCACAACCGGCTTCATCGTTATGGTCCACTTGGTTAAGTTGATTTTGTGCATGGGAATTTGCCGCTACTGCAAAATGCCCTCCAGGGATGGCTTCTGCCTTGCTCTCATTATGAGTTGCAAAGGTCTTGTTGATATCTGCTCCTATACCATTGTCTACGACGCAATGGCACAAAGTAAACGAATAGTAGCTGTTATGATCGTCTCGGTGCTGATCCTAGGAACAACTTCTAGGTTTGGTGTGAAGGCATTGTATGACCCTTCAAGGAAATACGCAGGATATCAGGAAAGGAACATCATGAGCTTGAAAGAGAACTGCGAGCTTCGGGTTGTTGCATGCATCCACAAGCCATGTCACACGAATCACATCAAGAACGTTCTCCAGCTTTGCGCCCCTAGACCAGAGAACACACTAGTGGCTGAGATAGTTCATCTCATGGAGCTAGTTGGAAGGTCCACACCTATTTTCATTGCACACAAGCTTCAGCACAGTGTAGATTCATCATCATCCTACAACTACTCCGGGGAACTCATCGTGACCTTCGACCTTTTCGAACGTGACCATGTTGGTTCCGCCACAGCCAACACCTACACAGCCATATCACCAGTGACACTAATGCATGAAGATGTTTGTAACCTTGCTTTGGACAAAAACGCAGCCCTAATAATCCTTCCATTTCACGTGAAATGGGGAGGGGATGGTTCTATAGAGTCACGAGACGACGACATAAGGGCACTGAATTCAAAGGTTTTGGAAAGGGCACCTTGCTCAATTGGGATTCTAGTCAACCGTGGCCCTTCTGGCATCAACGTCTCTGCGTGTTACAATGTGGCTTTGATCTTCTTTGGTGGACCTGATGATATAGAAGCTTTGTATTTGGCTAAGAGATTTGCCAAAAATGTTGAAAATAGGTTGTTTGTGTATAGGTTGCTAGCACGTGACCGTGATGCATCGGATTGGGAACAAATGATTGATGATGAGGAGTTAAGGAAGGTTTGTGGAACTTATGTACAACATGAAAATGTGACATATGAAGAGAGGACTATAGATGATGCATCAGAGACAATGTTTTTCGTCAAAGAACTAGCAAACAATTTTGATTTTATCATAGTTGGGAGACGCAATGAGTTGAGAACTTCTCAGACTTCTGGGTTGGAAAATTGGACTGAACATTCGGAGTTGGGGGTCATTGGTGATTTGCTTGCTTCACCAGATACGGAGACTAGAGCATCCATTTTGGTTGTTCAGCAACAACAGTCAGCTTCTACGTCACCACATCCATAA 2391 0.4458 MNSNGTIFSSATFMYDIPKMRQDVYNVCLDQPMTIISDGIWSGHNHIGSIPSKSAFTMLELQIVIIFAVTQGFHFFLKRIGIPYFVSQVMAGFLLGPSIPTGPLEKYKQMLFPFGSPDILSTVSAMGYSFFLFVNSVKMDLSLITKTGKKAWVLALSSYFIPIFVGYVFRKIFFQAFYGLLSEDVYNLPVVFISSSGCSFAVVTVLLNDLGILNSELGRLALSATFVSDLSGGIMAGIGTAIISESKGVGYRIENVAVFLAYLIFVPLIGRPAMMWVVKRTPEGRSVKKVYICIIIMVVCALGYFARFFRQPFFAAAVIFGLAVPEGPPLGSELVNQLELFSTFLSSIFVTCCIMKVDLTQCDSLTLFLVTTGFIVMVHLVKLILCMGICRYCKMPSRDGFCLALIMSCKGLVDICSYTIVYDAMAQSKRIVAVMIVSVLILGTTSRFGVKALYDPSRKYAGYQERNIMSLKENCELRVVACIHKPCHTNHIKNVLQLCAPRPENTLVAEIVHLMELVGRSTPIFIAHKLQHSVDSSSSYNYSGELIVTFDLFERDHVGSATANTYTAISPVTLMHEDVCNLALDKNAALIILPFHVKWGGDGSIESRDDDIRALNSKVLERAPCSIGILVNRGPSGINVSACYNVALIFFGGPDDIEALYLAKRFAKNVENRLFVYRLLARDRDASDWEQMIDDEELRKVCGTYVQHENVTYEERTIDDASETMFFVKELANNFDFIIVGRRNELRTSQTSGLENWTEHSELGVIGDLLASPDTETRASILVVQQQQSASTSPHP 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00811 796 Pfam Sodium/hydrogen exchanger family 63 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca09g00811 796 PANTHER CATION/H+ EXCHANGER 2 15 790 - -
Cca09g00811 796 PANTHER CATION/H + ANTIPORTER 15 790 - -
Cca09g00811 796 Gene3D - 57 461 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00811 Cca-Chr9 24334197 24339258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00811 27 788 Antiporter Super Family AT5G22900 35.000 6.05e-146 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00811 - - gmx:100797272 1125.54