Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00809 ATGGCCTTAGCTATGGTGGGAGAGGCACTTATCTCTGCCTCTGTGGATATCTTATTAAAAAGGATAGCTTCGAGAGAGTTTCGAGATTTCTTCTCCACCAGAAAGCTTAATGTTTCTGTGTTGGACGAGTTGAAGATAAAGCTCTTGGCACTTAACGCTGTGCTCAATGATGCTGAGGAGAAGCAGGTCACTGATCTTGCAGTGAAGGCATGGCTTGATGAGTTGAAAGAGGTTGTCTTAGATGCTGAGGACTTGTTGGATGAAATCAACACAGATGCTCTAAGATGCAAGTTGGAGGGAGATTCTAAAACATTTGCTACCAAGGTCAGATCCTTGTTTTCTTCTCGCTTTAAAGGTCTCTATAAGAGCATGAATTCCGAGCTTGAAGCAATATCCGGAAGGCTAGAACATTTTGTGAGACAAAAAGATATTCTTGGCTTGCAAAGTGTTACTAGGAAAGTCTCTTATAGAAAAGTTACAGATTCGTTGATTGAATCTGTTGTGATTGCTAGAGAGGATGACAAGGAGAAGCTACTGAACATGCTTCTATCTGATGATGATGTCATCACTAATGATATGGAAGTGATCACAATATTGGGTATGGGGGGTCTTGGAAAAACAACCCTCGTTCAGTCTCTTTATAATGATAGTGGAGTGAGGAAGCATTTTGATTTGGCAGCTTGGGCATGGGTTTCAGATGATTTTGATGTTCTCAAGGTGACAAAGATGATTGTTGAGTCTCTCACCTTGAAAGATTGCCATCATATTACTAATCTTGACCTTCTTCGTGTTGAATTAAAGAACAGTTTAAGAGATAAGAAATTTTTGCTTGTGCTTGATGACCTTTGGAATGAAAAGTATAATGATTGGCATCATCTAGTAGCACCATTTAGTGGTGGGAAAAAGGGAAGTAAGATCATCGTGACAACTCGACAACAAAGAGTTGCACAGGTGACACATACCTTTCCCATTTATGAGCTGAAACCTCTTACTGATGAAAATTGTTGGCACATACTATCTAGGCATGCATTTGGAAATGAAGGTTATGAGAAATATCCAAACTTGGAAGAAATTGGTAGGAAACTTGCAAGAAAATGCAATGGACTGCCATTGGCTGCTAAAACGCTGGGAGGTCTTTTGCGATCAAATGTTGATGTTGGGGAATGGAATAGAATTCTGAACAGTAAATTGTGGGCACATGATGATGTTTTACCAGCTTTACGCATAAGTTATCTTCATCTTCCGGCACATTTGAAGAGATGTTTTGCCTATTGCTCAATGTTTCCGAAGCAACATTTGTTGGATAGGAAAGAAATGATTTTGTTATGGATGGCTGAAGGTTTTCTTCAACATATCCATGAAGATAAAGCAATGGAATTGGAATCAGCAGGTGAGGATTGCTTTAACGAATTATTATCTAGATCCTTAATTCAAAAAGACAATGCTATTGCAGAGGAAAAATTTCAAATGCATGACCTCATCTATGATTTAGCCAGACTTGTATCTGGAAAAAGTTCCTATAACTTTGAAGGAAGTGGGATTCCAAAAACGGTTCGCCATTTATCATTTATTAGAGAGATGTTTGATGTCTCCAAAAAGTTTGAGGGTTTGTATGAGCTGAAGTGTTTGCGAACTTTTCTACCACAATTGGGATATCCATTTGAAGAATGTTACTTGACCAAAACGGTATCACATGGTTGGTTGCCAAAACTAAGATGCTTGCGAATATTGTCGTTGTCTAACTACAAAAATATCACAGAGCTACCCGATTCAATTGGCAATTTGTTGCTCTTGAGATATTTGGATCTTTCCTACACTTCCATCGAAAGCTTACCCAATGAAACATTTATGCTTTACAATTTGCAAAGTTTGATATTATCTAATTGTGAATTTCTTATTCAATTGCCACAACAGATAGGAAATCTGGTTAATTTGCGCCACCTTGACATCAGTGGCACTAATTTACTTGAGATGCCGGCACAAATCTGTAGACTACAAGCTCTTCATACTTTGACAGTTTTTATTGTTGGAAGACCAGGTGGATTAACTATTAAAGATTTAAGAAATTTTCCTTGTCTGCAGGGTAAGCTTGCCATTTTTAACCTACAAAATGTTGTTAATCCAATGGATGCATCTCGGGCCAATTTAAAGAACAAAGAGCAAATTGAGGATCTTATGCTGGAATGGAGCAGTGATCCACATGATCCACAAATTGAAAAAGATGTACTTGACAATTTGCAGCCATCAACTAATTTAAAGAAACTCAACATTAAATATTATGGTGGTACTTCATTTCCAAATTGGATTGGAGATTCTTCATTTTCAAACATCACAGTCCTTGGTATCAGTGATTGCAACCATTGCTTGTCACTTCCGCCATTTGGACAACTACCTTCCCTCAAGGAGCTTGTCATCAAAAGGATGAAAATGGTGAAGACAGTTGGTTATGAGTTCTATTGCAGCAACGAAGGCTCCCGGTTGTTTCAGCCATTTCCATCATTGGAGAATCTGGAATTTGAGGATATGTCTGAGTGGCAGGAGTGGCTACCATTTGAAGGTGAAGGAAGCAACGCTCCTTTTCCTTGTCTTAAACGCTTGCATTTATATATGTGCCCCAAGCTGAGAGGAATCTTGCCCAATTGTCTACCTTCACTGACAGAGGTTAGTTTCTCAGAGTGCAACCAGCTAGAGGTAAAATCATCTGATTTGCACTGGAATACATCAATGGATGTAATAAATATTAGAGAGGGACAAGAAGGCTTGTTGTCTATGCTTGACAACTTCTCTTATAGTGAACTATTGATTGAAAAGTGTGATAGTTTGCAGTCTGTGCCTAGAATAATACTCGTTGCAAATTGTCTTGGAAAGTTAACTCTTTCTAATATCCCATCTTTGATTTCCTTCCCAGCTGATGGTTTACCCACATCATTGAGATCACTGAGCATTTGGAATTGCAGAAAGTTAGAATTTCTATCTCATGATACATGGCACAAATTTAAATCACTTGAAAAACTAAGAATATGGAATAGTTGTCGTTCCCTGACATTCCTTTCGTTAGGTTGTTTCCCTGCCCTTCAAGAACTTTATATCCGTTTTATTCCAAACTTGGAAGCAATTACTACTCAAGGTGGAGAGGCGGCTCCTAAATTAGTTGATTTTATTGTCACTGATTGTGAGAAACTTAGATCATTACCAGATCAGATTGATCTCCCTGCCCTTGAACACTTGGACCTTTCTGCACTTCCGAAGCTAGCATCATTGTCCCCAAAGTGTTTGCCTTCCAATTTACGATCACTTTTTGTTGATGTTGGAATACTTTCATCTATGTCTAAACAAGAGTTAGGTTTGGTATTCCAAAGCCTCACTTCTCTGTCACATCTTTTATTTAAGGGTCTTAATGATAATGATCTTATTAACACTCTTCTGAAGGAGCAATTACTGCCTACTTCTCTCAAAATTCTGATCCTACACAGTTTTGATGGATTAAAGTTGTTGGAAGGAAAAGGGCTTCAAAATCTCACTTCTCTCCAACAGATGTACATGTACAATTGTCCAAGCTTTGAGTCCTTACCTGAAAATCAGCTGCCATCCTCTCTTGTAGTACTCAGTATGCGGGAGTGTCCTTTACTGGAAGCAAGGTATCAAAGTCAGAACGGGAAATACTGGTCTAAGATTGCTCACATTCCTGCAATCAAGATAAATGAAAAAGTGATAATATGA 3720 0.3844 MALAMVGEALISASVDILLKRIASREFRDFFSTRKLNVSVLDELKIKLLALNAVLNDAEEKQVTDLAVKAWLDELKEVVLDAEDLLDEINTDALRCKLEGDSKTFATKVRSLFSSRFKGLYKSMNSELEAISGRLEHFVRQKDILGLQSVTRKVSYRKVTDSLIESVVIAREDDKEKLLNMLLSDDDVITNDMEVITILGMGGLGKTTLVQSLYNDSGVRKHFDLAAWAWVSDDFDVLKVTKMIVESLTLKDCHHITNLDLLRVELKNSLRDKKFLLVLDDLWNEKYNDWHHLVAPFSGGKKGSKIIVTTRQQRVAQVTHTFPIYELKPLTDENCWHILSRHAFGNEGYEKYPNLEEIGRKLARKCNGLPLAAKTLGGLLRSNVDVGEWNRILNSKLWAHDDVLPALRISYLHLPAHLKRCFAYCSMFPKQHLLDRKEMILLWMAEGFLQHIHEDKAMELESAGEDCFNELLSRSLIQKDNAIAEEKFQMHDLIYDLARLVSGKSSYNFEGSGIPKTVRHLSFIREMFDVSKKFEGLYELKCLRTFLPQLGYPFEECYLTKTVSHGWLPKLRCLRILSLSNYKNITELPDSIGNLLLLRYLDLSYTSIESLPNETFMLYNLQSLILSNCEFLIQLPQQIGNLVNLRHLDISGTNLLEMPAQICRLQALHTLTVFIVGRPGGLTIKDLRNFPCLQGKLAIFNLQNVVNPMDASRANLKNKEQIEDLMLEWSSDPHDPQIEKDVLDNLQPSTNLKKLNIKYYGGTSFPNWIGDSSFSNITVLGISDCNHCLSLPPFGQLPSLKELVIKRMKMVKTVGYEFYCSNEGSRLFQPFPSLENLEFEDMSEWQEWLPFEGEGSNAPFPCLKRLHLYMCPKLRGILPNCLPSLTEVSFSECNQLEVKSSDLHWNTSMDVINIREGQEGLLSMLDNFSYSELLIEKCDSLQSVPRIILVANCLGKLTLSNIPSLISFPADGLPTSLRSLSIWNCRKLEFLSHDTWHKFKSLEKLRIWNSCRSLTFLSLGCFPALQELYIRFIPNLEAITTQGGEAAPKLVDFIVTDCEKLRSLPDQIDLPALEHLDLSALPKLASLSPKCLPSNLRSLFVDVGILSSMSKQELGLVFQSLTSLSHLLFKGLNDNDLINTLLKEQLLPTSLKILILHSFDGLKLLEGKGLQNLTSLQQMYMYNCPSFESLPENQLPSSLVVLSMRECPLLEARYQSQNGKYWSKIAHIPAIKINEKVII 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00809 1239 Gene3D - 33 137 - -
Cca09g00809 1239 Coils Coil 41 61 - -
Cca09g00809 1239 Gene3D - 148 322 IPR027417 -
Cca09g00809 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Cca09g00809 1239 SMART LRR_typ_2 642 665 IPR003591 -
Cca09g00809 1239 SMART LRR_typ_2 1070 1094 IPR003591 -
Cca09g00809 1239 SMART LRR_typ_2 595 618 IPR003591 -
Cca09g00809 1239 Coils Coil 72 92 - -
Cca09g00809 1239 PANTHER - 61 924 - -
Cca09g00809 1239 ProSiteProfiles Leucine-rich repeat profile. 597 618 IPR001611 GO:0005515
Cca09g00809 1239 Pfam NB-ARC domain 171 394 IPR002182 GO:0043531
Cca09g00809 1239 PANTHER DISEASE RESISTANCE PROTEIN RP 61 924 IPR044974 GO:0006952
Cca09g00809 1239 PRINTS Disease resistance protein signature 195 210 - -
Cca09g00809 1239 PRINTS Disease resistance protein signature 269 283 - -
Cca09g00809 1239 PRINTS Disease resistance protein signature 366 380 - -
Cca09g00809 1239 PRINTS Disease resistance protein signature 640 656 - -
Cca09g00809 1239 SUPERFAMILY L domain-like 932 1224 - -
Cca09g00809 1239 Pfam Rx N-terminal domain 39 104 IPR041118 -
Cca09g00809 1239 SUPERFAMILY L domain-like 489 914 - -
Cca09g00809 1239 Gene3D Ribonuclease Inhibitor 552 917 IPR032675 -
Cca09g00809 1239 Gene3D - 410 500 IPR036388 -
Cca09g00809 1239 CDD RX-CC_like 13 135 IPR038005 -
Cca09g00809 1239 Gene3D Ribonuclease Inhibitor 918 1225 IPR032675 -
Cca09g00809 1239 Gene3D - 329 409 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00809 Cca-Chr9 24227813 24233809 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00809 192 839 WRKY Transcription Factor Family AT5G45050 23.229 5.83e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00809 - - gmx:100803330 2113.58