Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00803 ATGGCCCTTGCTATGGTGGTGGGAGAGGCTCTTATCTCTGCTTCTGTGGAGATCTTGCTGGATAGAATTACTTCTCCAGAGTTTCGAGATTACTTTGCCAACAGAAAGTTCAATGTTTCTCTCTTGGATGAGCTGCAGATAAAGTTGTTTTCACTCAATGCTGTGCTGAATGATGCTGAGGAAAAACAGATCACTGATCTTGCAGTGAGGGCATGGCTTGATAAGCTGAAAGATGCTGTCTTAGATGCGGAGGACTTGTTGGATGAAATCAACACAGATTCTTTGAGGTGCAAGGTGGAGGGAGAATCTAAAACCTTCACTACCCAGGTCAGATCATTCCTTTCTTCTCCCTTTAATCAATTTTATCGGAGCATCAATTCCAATCTTGAAGCAATATCTACAAGGCTAGAACATTTTGTGAAACATAAAGATATTCTTGGTTTGCAAAGTGTTTCTAGGAGAGTATCTTCCAGAACAGTTACAGATTCATTGGTTGAATCAGTTGTTGTTGCAAGGGAGGATGACAAAGAGAAGCTACTGAGAATGCTTCTATCTGATGAAGATGGGAAGAACAATCATATAGAAGTGCTGACAATATTGGGCATGGGTGGTCTTGGAAAAACAACCCTAGCTCAATGTCTTTATAATGATAATGCAGTGCAGAAACATTTTGATTTGACAACTTGGGCATGGGTATCTGATGATTTTGATGTGTTTAGAGTTACGAAGACTATTGTTGAATCTGTCACTTCTAAAAAGTTTGATAATACTAATTTAGATGCACTTCGGGTTGAATTGAAGAACAACTTAACTGATAAAAAATTCTTGCTTGTGCTGGATGACCTTTGGAATGAAAAATACAATGACTGGAATCATTTAATAGCACCTTTTACCAGTGGAAAGAAGGGAAGTAAGATCATTGTGACAACCCGACAACATAGAGTTGCACAAATAACACACACATTTCCCATATGTGAGCTGAATCGTCTAACAGATGAAAATTGTTGGTGCATACTTGCAAAACATGCATTTGGAAATGAAGGATTCAACAAATATCCAATGCTAGAAGAAATTGGTAGAAGAATTGCAAGAAAATGCGATGGCCTACCACTAGCAGCTAAAACATTGGGAGGTCTTTTGAGATCAGTTGTTGATGTAGAGGAATGGAATAGAATTCTGAACAGCAACTTATGGGCACATGACGATGTTACACCTGCTTTACGCATAAGTTATCTTCATCTTCCGGCACATTTGAAAAGATGTTTTGCTTATTGCTCAATTTTTCCCAAACAACATTTGTTGGATAGGAAGGAATTGATTTTGTTATGGATGGCTGAAGGCTTTCTTCAACAAATCCATGGAGAGAAATCATTGGAATCAGTAGGTGATGAATGCTTTAATGAATTATTATCAAGATCTTTAATTGAAAAAGACAAAGCTAAAGTAGAGGAAAAGTTTCGAATGCATGATCTCATCTATGATTTAGCTAGACTAGTATCGGGAAAAAGTTCTTACAACTTTGATGGTAATGAAATTCCAAGAACTGCTCGTCATTTAGCATTTCCTGTGAAAATATTTGATGTCTCTAAAAGATTTGAGGGCTTGTATGATCTAAAGTTTGTGCGCACTTTTCTACCACAGTCCCCTTATCCATTTGGTGATTTTTACTTAACCAAAAGGGTGTCACATGGTTGGTTGCCAAAACTAAGATGTTTGCGAACACTATCATTGTCAGAATACAAAAATATCACTGAGTTGCCTGATTCGATTGGAAATTTGGTGCTTTTACGGTATCTTGACCTTTCCTCTACTCCCATCAAAAAATTGCCCGATGCAACCtttacactttacaatttgcaaactctgaaattagcaaattgtaaattTCTTATCCAGCTTCCAAGACAGATAGAAAATTTGATCAATCTACGTCACCTAGATATTAGGGACACAAATTTGAATGAGTTACTAACACAAATATGCAAACTACAGGATCTTCGTACATTGACTTCCTTTGTTGTAGGAAGAAAAGATGGATTAAGCATCAAAGAATTACGAAAATTTATTTTTCTACAAGTTAACCTTTCCATTTTGAAGCTACAAAATGTTGTTGATCCCATGGATGCATTTCAAGCCAACATGAAGAAAAAAAAGCAGATTGAGGAGCTTACGCTGGAGTGGGGAAGAGATCCACAAGATTCACAAATTGAGAAAGATGTACTTGAGAACCTGCAACCATCAACAAATCTAAAGAAACTCACCATCAGATACTATAGTGGCACAAGCTTTCCGAAATGGTTAAGTGAGTCTTCGTATTCTAATGTTATAGTCCTTCGTATCAGTAACTGCAACTATTGCTTGTCACTTCCACCATTTGGACAATTACCTTCTCTTAAGGAGCTTGTGATTCAAAGGATGAAAATGGTGAAGACAGTTGATGAAGAATTCTATAGCAACAATGAAAGATCCTCTTTATTTCAGCCATTTCCAATGTTGGAGAGTCTCCGGTTTGAAAAGATGTTAGAATGGGAGGAGTGGCTACCATTTAAAGGTGAAAATAGCGAATTTTGTTTTCCTTTGCTGAAGCATTTGAGTTTATCCCAATGTCCGAAGTTGAGAGGAAACTTGCCCAACCATCTGCCTTCATTAAAAGAGGTTAGTATCTCAAAATGCAACCAATTAGAGGCAAAATCATGTGATCTACACTGGAACACATCAATTGAATCTTTATCAATTAGTGAAGGGGGAAAAGGCTTGTTGTCTCTTCTTGACGAATTTTCGTATGAGAAGCTAAATATTTTCAAATGGGATAGCTTGTCGTGTTTGCCAAGAATGATACTAGGTGCCAATTGTCTTCAAAGGCTGACTCTTAACAATATCCCCTCTTTGATTTCCTTCCCAAATGATGGTTTGCCCACGTCATTGAAATCACTTGAGATTAGATATTGTGAGAACTTAGAATTTTTATCTCATGAAACGTGGCACAAATACACATCACTTGAATCTCTGAGAATTTCACATAGTTGTCATTCTCTTACGTTCATTACATTAGATTGTTTCCCTGCTCTTGAAACTCTATGTATCTACTCGTGTCCCAACTTGGAAGCAATTACTACTCAAGGTGGAGGGCCTGCTCCCAAATTAATAAATTTTTGGGTCCATGATTGTGAGAAACTTAGGTCACTTCCAGAACTGATTGATCTCCCTTCCCTTAAATACTTAAGTCTCTCTAAGCTTGCAGTGGTAGCATCATTGGGTGCAAGGTGTTTGCCTTCAAGTTTACAATCACTGACGGTTGGTGTTGGAATGTTATCATGTATGTCTAAAGATGAGCTAGGTTTCCTATTCCAACGCCCCACTTCTCTGTCTGAGCTTTGTATTAAGGGTGGTGGGGAGGCAGATGTTGTTAACATCATGCTGAAGGAGCCGTTACTGCCCACTTCTCTTCAAGGGCTGTACCTTGAGAGTCTTGATGGTTTGGAGTGTTTGGGAATGGAAGGAAAAGCGCTTCAACATCTCACATCTCTCCAGTCTCTCACCCTATGGGGTTTAGATGAATTGAAGTCGTGGGAAGGGAATGGGCTTCAACATCTCACTTCTCTCCGAATGCTTCGGATTGATGGTTGTGGAAGCCTTGAGTCTTTGCCAGAAGATCACTTGCCATCCTCTCTTGAATTATTGGAGATATACAGATGTCCTTTACTAGAAGAAAGGTATCAAAATCAGAAAGGGAAATATTGGTCTAAGATTGCCCACATTCCTGCCATCGAGATAAAGGATGAAGTGATAATATGA 3795 0.3808 MALAMVVGEALISASVEILLDRITSPEFRDYFANRKFNVSLLDELQIKLFSLNAVLNDAEEKQITDLAVRAWLDKLKDAVLDAEDLLDEINTDSLRCKVEGESKTFTTQVRSFLSSPFNQFYRSINSNLEAISTRLEHFVKHKDILGLQSVSRRVSSRTVTDSLVESVVVAREDDKEKLLRMLLSDEDGKNNHIEVLTILGMGGLGKTTLAQCLYNDNAVQKHFDLTTWAWVSDDFDVFRVTKTIVESVTSKKFDNTNLDALRVELKNNLTDKKFLLVLDDLWNEKYNDWNHLIAPFTSGKKGSKIIVTTRQHRVAQITHTFPICELNRLTDENCWCILAKHAFGNEGFNKYPMLEEIGRRIARKCDGLPLAAKTLGGLLRSVVDVEEWNRILNSNLWAHDDVTPALRISYLHLPAHLKRCFAYCSIFPKQHLLDRKELILLWMAEGFLQQIHGEKSLESVGDECFNELLSRSLIEKDKAKVEEKFRMHDLIYDLARLVSGKSSYNFDGNEIPRTARHLAFPVKIFDVSKRFEGLYDLKFVRTFLPQSPYPFGDFYLTKRVSHGWLPKLRCLRTLSLSEYKNITELPDSIGNLVLLRYLDLSSTPIKKLPDATFTLYNLQTLKLANCKFLIQLPRQIENLINLRHLDIRDTNLNELLTQICKLQDLRTLTSFVVGRKDGLSIKELRKFIFLQVNLSILKLQNVVDPMDAFQANMKKKKQIEELTLEWGRDPQDSQIEKDVLENLQPSTNLKKLTIRYYSGTSFPKWLSESSYSNVIVLRISNCNYCLSLPPFGQLPSLKELVIQRMKMVKTVDEEFYSNNERSSLFQPFPMLESLRFEKMLEWEEWLPFKGENSEFCFPLLKHLSLSQCPKLRGNLPNHLPSLKEVSISKCNQLEAKSCDLHWNTSIESLSISEGGKGLLSLLDEFSYEKLNIFKWDSLSCLPRMILGANCLQRLTLNNIPSLISFPNDGLPTSLKSLEIRYCENLEFLSHETWHKYTSLESLRISHSCHSLTFITLDCFPALETLCIYSCPNLEAITTQGGGPAPKLINFWVHDCEKLRSLPELIDLPSLKYLSLSKLAVVASLGARCLPSSLQSLTVGVGMLSCMSKDELGFLFQRPTSLSELCIKGGGEADVVNIMLKEPLLPTSLQGLYLESLDGLECLGMEGKALQHLTSLQSLTLWGLDELKSWEGNGLQHLTSLRMLRIDGCGSLESLPEDHLPSSLELLEIYRCPLLEERYQNQKGKYWSKIAHIPAIEIKDEVII 1264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00803 1264 Coils Coil 73 93 - -
Cca09g00803 1264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 425 IPR027417 -
Cca09g00803 1264 SUPERFAMILY L domain-like 938 1250 - -
Cca09g00803 1264 PRINTS Disease resistance protein signature 196 211 - -
Cca09g00803 1264 PRINTS Disease resistance protein signature 269 283 - -
Cca09g00803 1264 PRINTS Disease resistance protein signature 366 380 - -
Cca09g00803 1264 PRINTS Disease resistance protein signature 878 894 - -
Cca09g00803 1264 Gene3D Ribonuclease Inhibitor 556 914 IPR032675 -
Cca09g00803 1264 Pfam Rx N-terminal domain 13 105 IPR041118 -
Cca09g00803 1264 SUPERFAMILY L domain-like 487 913 - -
Cca09g00803 1264 PANTHER - 56 919 - -
Cca09g00803 1264 Gene3D Ribonuclease Inhibitor 1140 1245 IPR032675 -
Cca09g00803 1264 Gene3D Ribonuclease Inhibitor 950 1138 IPR032675 -
Cca09g00803 1264 Gene3D - 40 131 - -
Cca09g00803 1264 PANTHER DISEASE RESISTANCE PROTEIN RP 56 919 IPR044974 GO:0006952
Cca09g00803 1264 Pfam NB-ARC domain 173 394 IPR002182 GO:0043531
Cca09g00803 1264 Gene3D - 329 409 IPR042197 -
Cca09g00803 1264 Coils Coil 42 62 - -
Cca09g00803 1264 Gene3D - 410 498 IPR036388 -
Cca09g00803 1264 Gene3D - 149 322 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00803 Cca-Chr9 23981703 23989529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00803 583 678 WRKY Transcription Factor Family AT4G12020 40.206 5.81e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00803 - - ccaj:109804933 2174.44