Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00758 ATGACTAATTCCTTCAAAGTTAAACTAGGCCAAGGTGGTTTTGGTGCAGTGTACAAAGGAAAGCTACCCAACAATTGCCCCGTGGCTGTAAAATTATTGAATGCATCAAAACGAAATGGAGAAGACTTTATCAATGAGGTTGCTAGCATCAGTAGAACCTCTCACATTAATATTGTCACACTTCTTGGATTTTGTTTGGAAGGTCGCAAGAAAGCTCTCATCTATGAATTTATGACCAATGGTTCCTTGGAAAAATTTATCTACCAAAAAGGGCCAGAATCTATTGCATCTCTGAGTTGGGAGAATCTTTATCAAATCTCCATAGGGATAGCTCGAGGGTTGGAATATTTGCACAGGGGATGCAACACTCGAATTTTGCATTTTGACATAAAGCCACATAATATTCTTTTGGATGAGAACTTTTGTCCCAAGATATCAGATTTTGGGTTAGCAAAACTTTGTACTAGGAAAGAGAGCATTATTTCCATGTCAGATACAAGAGGGACACTAGGGTATGTAGCTCCAGAAATGTGCAATAGACATTTTGGTGGAGTTTCACATAAGTCTGACGTTTATAGCTATGGAATGTTGCTGCTAGAAATGGTAGGAGGGAGGAAGAACATTAATGCTGAAGCTAGTCACACAAGTGAAATATACTTCCCACATTTGGTATACAGAAGGCTTGAGTTGGACAATGATTTAAGACCAGATGAGGTGATGACCACTGAAGAAAATGAGATTGTAAAGAGAATGACCATAGTGGGTTTATGGTGCATTCAAACGTTTCCAAATGATAGACCTACAATGAGTAGAGTAGTAGATATGTTGGAAGGAAGCATGAATGCCTTGGAAATACCACCAAAACCTATGTTTTCTTCTCCTACTAGATCCACTTCAGAATCTCCCTCTTAA 912 0.3871 MTNSFKVKLGQGGFGAVYKGKLPNNCPVAVKLLNASKRNGEDFINEVASISRTSHINIVTLLGFCLEGRKKALIYEFMTNGSLEKFIYQKGPESIASLSWENLYQISIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCTRKESIISMSDTRGTLGYVAPEMCNRHFGGVSHKSDVYSYGMLLLEMVGGRKNINAEASHTSEIYFPHLVYRRLELDNDLRPDEVMTTEENEIVKRMTIVGLWCIQTFPNDRPTMSRVVDMLEGSMNALEIPPKPMFSSPTRSTSESPS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00758 303 CDD STKc_IRAK 9 278 - -
Cca09g00758 303 Gene3D Transferase(Phosphotransferase) domain 1 78 285 - -
Cca09g00758 303 SUPERFAMILY Protein kinase-like (PK-like) 7 277 IPR011009 -
Cca09g00758 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Cca09g00758 303 PIRSF ILK 3 284 - -
Cca09g00758 303 SMART serkin_6 3 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00758 303 Pfam Protein kinase domain 6 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00758 303 ProSiteProfiles Protein kinase domain profile. 3 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00758 303 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Cca09g00758 303 MobiDBLite consensus disorder prediction 284 303 - -
Cca09g00758 303 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Cca09g00758 303 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 301 IPR045874 GO:0004672
Cca09g00758 303 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00758 Cca-Chr9 22269835 22270746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00758 1 303 Receptor kinase-like Gene Family AT1G66910 58.306 6.59e-124 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Cca09g00758 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00758 - - gmx:100799800 546.969