Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00744 gaccctcttgccatttTTCCAAGAGTTCTAGGTCATGAGGCAACTGGGGTTATGGAAAGTATAGGGAAGGATGTAACTGAAGTTACGAAAGGTGATTTGGTTGTTCCTGTTATCCTTCCAGAATGTGGAGAGTGCATAAATTACAAATCAACCAAGAGCAACCGTTGTACTAATTTCCCTTTCAACGTGTCTCCCTGGATGCCTAGAGATGGTACAACTAGATTCACTGACCAAAATGGAGATATCATATACCATTTCTTGTTTATTTCAAGTTTCAGTGAGTACACTGTGGTGGACATTGCCAATCTAATAAAGATTGACCCAGAAATTCCTCCTAACAGGGCATGCCTTTTCGGATGTG 361 0.3906 DPLAIFPRVLGHEATGVMESIGKDVTEVTKGDLVVPVILPECGECINYKSTKSNRCTNFPFNVSPWMPRDGTTRFTDQNGDIIYHFLFISSFSEYTVVDIANLIKIDPEIPPNRACLFGC 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00744 120 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 11 25 IPR002328 GO:0008270|GO:0016491
Cca09g00744 120 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 3 120 - -
Cca09g00744 120 PANTHER ALCOHOL DEHYDROGENASE 3 120 - -
Cca09g00744 120 SUPERFAMILY GroES-like 4 120 IPR011032 -
Cca09g00744 120 Pfam Alcohol dehydrogenase GroES-like domain 6 106 IPR013154 -
Cca09g00744 120 Gene3D - 5 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00744 Cca-Chr9 21703597 21705432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00744 4 94 Monolignol Biosynthesis Gene Families AT4G39330 30.435 2.61e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00744 K00121 - gmx:100817521 232.261