Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00743 GTTATAGAGGGAGCCAGACTTTGTGGAGCTACTAGGATTATAGGTGTGGACATCAACCCAGAAAAATTTGAAATTGGAAAGAAATTTGGAGTAACAGACTTTGTCAATGCTGGAGAATGTGGGAACAAACCTATTATCATAGAGAAAACTGGTACGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGATTCTTGAAGCATATGCTTCTTGTAGAATGGGTTGGGGAAAAACAATTGTGTTAGGAGTGGACAGGCCAGGAGCCAAGATAAACCTCAATTCTCATGATGTCCTCCATGACGGGAAGAGCCTCATGGGATCCTTATTTGGAGGTCTCAAACCCAAGTCTCATGTACCCATTCTCCTTAAACGTTACGTAGATAAGGAGTTGTAG 402 0.4179 VIEGARLCGATRIIGVDINPEKFEIGKKFGVTDFVNAGECGNKPIIIEKTGTGADYCFECVGMASLILEAYASCRMGWGKTIVLGVDRPGAKINLNSHDVLHDGKSLMGSLFGGLKPKSHVPILLKRYVDKEL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00743 133 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 130 IPR036291 -
Cca09g00743 133 Pfam Zinc-binding dehydrogenase 1 114 IPR013149 -
Cca09g00743 133 Gene3D - 111 133 - -
Cca09g00743 133 PANTHER ALCOHOL DEHYDROGENASE 1 133 - -
Cca09g00743 133 Gene3D - 1 110 - -
Cca09g00743 133 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00743 Cca-Chr9 21696212 21702761 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00743 K00121 - gmx:100817521 242.276
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00743 09 21696212 21702761 Cca05g01759 05 37150521 37162491 PCT