Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00729 ATGCGATTTGATACGAACGCGGAACCGTTGGCGTTGCCACTGTTGCGAAGCAGAGAGAGTGAGAAGGAAGCATCAGCGTCAGGGAAGTCAAATGCAAATGCATCGCTGAGCGGCTCCGTGTTCAACTTGTCAACGACGATCATCGGCGCCGGAATCATGGCCTTGCCGGCGGCCATGAAAGTGGTGGGCGTGGCGGCGGGCGTGGGCGGCGTGGTGCTGCTCGCCGTCCTGACGCAGGCCTCGTTGGAGACTCTGCTCAGATTCAGCAGAGTCGCGAAGGCCTCATCCTACGCGCAACTCATGGGGTCCACTTTCGGGACTTGCGGAACGCTTCTGTTTCACTTCTCGGTGCTTATCAACAACACGGGGATACTCGTTGTCTACGTCATCATAATCGGTGATGTCTTGTCGGGAACGTCTTCCGGTGTGGGAGTTCATCACTTTGGGGTGCTCCAAGGCTGGTTTGGTCAATGCTGGTGGACTTCCCGTGCTTTTGTTCTTCTTCTCACCACGCTCTTCGTCTTTGCCCCCTTGGCCTTTTTGAAAAGGATAGATTCATTGAGACATACTTCTGCCTTAGCAGTGGCGCTGGCTATTGTGTTTCTACTCATAACTGCAGGAATCACATTCACCAAATTGTTTAATGGCAGTATAGCCAGTCCCAGGTTGCTTCCTAATATTACTGATGTTACATCCATATGGAATCTCTTTACTGCAGTTCCAGTTTTTGTGACAGCATTTGTTTGTCACTACAATGTGCATACAATAGACAATGAGTTAGGAGACCCTTCCCTGATGCAACCAGTTATACGTGCATCACTGGTTCTGTGTTCTAGTATTTATATTCTTACAGCAATATTTGGATTTCTCCTATTTGGTGAGTCAACACTTGATGATGTTCTGGCCAACTTTGATACTAATCTGGGCATCCCTTATAGCAGTCTACTCAATGACATTGTTCGTATCAGCTATGCCCTGCACCTCATGCTTGTTTTCCCAGTCATCTTCTTCTCACTGCGCTTCAATTTGGATGATCTTATCTTCCCTTCAGCTAGGTCCTTGGATTTGGATAAGTGTAGGTTTGTCTTGATCACCACTGGACTCATTTCCTTAATATATGTGGCTGCAAATTTTATACCTAGCATCTGGGATGCATTTCAATTCACTGGAGCCACTGCCACTGTTTGCCTTGGGTTTATTTTCCCTGCTGCAATTGCTCTTAGGGATCCCCATAGCATTGCAACAAAGAAGGACAAGATTTTATCCATTGTCATGATTTTTTTGGCCGTGTTCTCAAACGTTGTGGCTATATACAGCAATGTCAATGCCTTGTTCAGAAAACATGTTGCTCCTCACCCATGA 1362 0.4714 MRFDTNAEPLALPLLRSRESEKEASASGKSNANASLSGSVFNLSTTIIGAGIMALPAAMKVVGVAAGVGGVVLLAVLTQASLETLLRFSRVAKASSYAQLMGSTFGTCGTLLFHFSVLINNTGILVVYVIIIGDVLSGTSSGVGVHHFGVLQGWFGQCWWTSRAFVLLLTTLFVFAPLAFLKRIDSLRHTSALAVALAIVFLLITAGITFTKLFNGSIASPRLLPNITDVTSIWNLFTAVPVFVTAFVCHYNVHTIDNELGDPSLMQPVIRASLVLCSSIYILTAIFGFLLFGESTLDDVLANFDTNLGIPYSSLLNDIVRISYALHLMLVFPVIFFSLRFNLDDLIFPSARSLDLDKCRFVLITTGLISLIYVAANFIPSIWDAFQFTGATATVCLGFIFPAAIALRDPHSIATKKDKILSIVMIFLAVFSNVVAIYSNVNALFRKHVAPHP 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00729 453 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 12 451 - -
Cca09g00729 453 Pfam Transmembrane amino acid transporter protein 34 440 IPR013057 -
Cca09g00729 453 PANTHER AMINO ACID TRANSPORTER 12 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00729 Cca-Chr9 21394607 21399137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00729 5 452 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.946 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00729 K14207 - gmx:100778699 704.516