Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00712 ATGACGTCACGTTCTTCGGCGCACGGTAGCAGCGGTGGTGGGAGTGGAATGAGCAGGACCCGTGTGGGGAAGTACGAACTGGGTCGGACCCTGGGCGAGGGCAATTTCGCCAAGGTCAAGTTCGCGAGGCACGTCGAAACTAAAGAGAATGTCGCCATCAAGATTCTCGACAAGGAAAAGATTCTCAAGCACAAAATGATTGCCCAGATAAAACGAGAAATATCAACTATGAAACTGATTAGACACCCAAATGTCATACGTATGTATGAGGTAATGGCTAGCAAAACAAAGATATACATTGTATTGGAATTTGTGACTGGTGGAGAGCTGTTTGATAAAATTGCACGCAGCGGGAGGTTGAAAGAAGACGAAGCAAGAAAATATTTTCAACAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTTCCATAGAGACCTAAAGCCGGAGAATTTACTGCTGGATGCTAATGGAGTTCTTAAAGTATCAGATTTTGGATTGAGTGCATTGCCTCAACAGCTTCGGGAAGATGGGCTACTTCACACAACATGCGGTACGCCAAATTATGTTGCTCCAGAGGTGATTCACAACAAAGGCTATGATGGTGCAAAGGCAGATCTATGGTCATGTGGTTGTATTCTCTTTGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAACCAATCTAACAGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACGTGCCCCCCATGGTTCTCTTCAAGTGCAAAGAAACTAATCAACAGAATCCTTGATCCCAATCCTGCCACTCGGATTACATTTGCTGAGGTCATTGAGAATGATTGGTTCAAGAAAGGATATAAGCCACCCGTATTTGAACAGGCTAATGTTAGTCTTGATGATGTAAATTCTATTTTCGGTGAATCTACGGATTCAAAAAATCTTGTTGTAGAGAAGCGTGAAGTGGGGCCTGTGGCACCTGCAGCACCTGTGACTCTGAATGCCTTTGAGCTCATCTCCAAATCTCAGGGCCTCAATCTTAGTAGTCTTTTTGAGAAGCAAATGGGACTAGTTAAAAGGGAAACACGGTTCACATCCAAATATCCAGCAGATGAAATAATTTCAAAAATTGAACAAGCTGCAGGACCCCTGGGTTTTGATGTTAAGAAGAACAACTGTAAGTTAAAGATTCAAGGAGAAAAGACTGGACGGAAAGGTCATCTGTCTGTGGCTACTGAGATCTTAGAGGTGGCCCCTTCACTATACATGGTTGAGCTGCGTAAGTCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAAAACCTTTCTACTGGGCTAAAAGACATTGTTTGGAAATCCGAGCCTATCGACGAAGAAAAACAAGGTGCCAATACATCAAAATAA 1398 0.4263 MTSRSSAHGSSGGGSGMSRTRVGKYELGRTLGEGNFAKVKFARHVETKENVAIKILDKEKILKHKMIAQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARSGRLKEDEARKYFQQLICAVDYCHSRGVFHRDLKPENLLLDANGVLKVSDFGLSALPQQLREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGCILFVLMAGYLPFEETNLTALYKKIFKAEFTCPPWFSSSAKKLINRILDPNPATRITFAEVIENDWFKKGYKPPVFEQANVSLDDVNSIFGESTDSKNLVVEKREVGPVAPAAPVTLNAFELISKSQGLNLSSLFEKQMGLVKRETRFTSKYPADEIISKIEQAAGPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEILEVAPSLYMVELRKSEGDTLEFHKFYKNLSTGLKDIVWKSEPIDEEKQGANTSK 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00712 465 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 455 - -
Cca09g00712 465 PANTHER SERINE/THREONINE KINASE 19 455 - -
Cca09g00712 465 CDD CIPK_C 331 446 - -
Cca09g00712 465 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00712 465 ProSiteProfiles NAF domain profile. 325 349 IPR018451 GO:0007165
Cca09g00712 465 Pfam NAF domain 327 387 IPR004041 GO:0007165
Cca09g00712 465 MobiDBLite consensus disorder prediction 1 17 - -
Cca09g00712 465 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g00712 465 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Cca09g00712 465 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00712 465 CDD STKc_SnRK3 24 279 - -
Cca09g00712 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Cca09g00712 465 Gene3D Transferase(Phosphotransferase) domain 1 17 323 - -
Cca09g00712 465 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00712 465 SUPERFAMILY Protein kinase-like (PK-like) 22 296 IPR011009 -
Cca09g00712 465 Gene3D Kinase associated domain 1, KA1 325 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00712 Cca-Chr9 20847059 20855245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00712 9 459 CBL-interacting serine-threonine protein kinases AT1G01140 66.958 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca09g00712 Pkinase 7.8e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00712 - - gmx:100788746 858.596