Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00675 ATGGAGATTTTCAAAGGCTTCTACATCAATCTTCTTCTCATCTTCATGCTATCAGCAGTTGCAGCCATCGACCCTTACTCAGAGGCACTCCTCAGCCTAAAGTCTGAACTTGTGGATGATGACAACACCTTGCACAACTGGATGGTGCCCTCCGGGGGAAAACTAAGTGGGAAATCCTATGCGTGTTCTTGGTCTGGTATCAAGTGTAACAATGACTCAACAATTGTAACTTCCATAGACCTTTCCATGAAGAAACTGGAGGGTGTGCTTTCAGGGAAGCAATTCAGCATCTTCACAAACGTTACTAGTCTCAACTTGAGCTACAATATCTTCTCTGGGCAGCTTCCAGCAGAGATTTTCAACCTCACCGGCCTAACAAGCTTGGACATTAGCAGAAACAACTTTTCTGGTCCCTTCCCTGGTGGAATTCCCAGACTCCAAAATCTTCTTGTGCTTGATGCCTTCAGCAACAGCTTTTCAGGTCCATTGCCTGCAGAATTTTCACAGCTAGCAAATCTCAAGGTTCTCAATCTAGCAGGGAGCTACTTCAAAGGATCAATTCCACCTGAATATGGTTCTTTCAAAAGCCTTGAGTTTCTTCATCTTGCAGGAAATTCTCTCACAGGAAGCATACCTCCAGAACTTGGTAACCTCAAAACAGTGACCCATATGGAGATTGGCTACAACTTGTACCAGGGTTTTATTCCACCCCAATTAGGTAACATGAGTCAGCTTCAGTATCTTGACATAGCAGGAGCAAATCTATCAGGCCCCATACCAAAGCAACTCTCCAACCTCACCAGTTTGCAATCACTTTTCCTCTTCAGAAACCAGCTCACAGGATCAATACCAAGTGAGCTAAGCAACATTGAATCTCTCACAGATTTAGATCTCTCTGTTAACTTCCTCTCAGGGTCCATTCCTGAAAGCTTCTCAGAGCTGGAAAACCTAAGACTTCTCAGTCTTATGTACAATGACATGAGTGGCACTGTTCCCAAAGGCATTGCACAACTGCCATCCTTGGAAACTCTTCTCATTTGGAACAACCGCTTTTCTGGGTCACTTCCGGAGAGCTTAGGGAGAAACTCCAAACTCAAGTGGGTGGATGTTTCCACAAACAATTTTGTTGGAAGCATACCACCAGACATTTGTGTGAGTGGAGTACTATTTAAGCTAATCCTGTTTTCAAACAAATTCACAGGTGGTCTTTCATCAATCTACAATTGTTCTTCCCTTGTTCGCCTTCGCCTAGAAGATAACTCATTCTCAGGAGAAATCAGTTTGAAATTCGGCCATCTTCCTGATATCTTATACATTGATCTGTCCAGGAACAACTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCTACTCAACTAGAGTATGTCAATGTCTCCTATAATATGAAATTAGGAGGCATAATCCCTCCACAAATGTGGTCTTTGCCCCAACTTCAGAATTTTTCAGCGTCTACTTGTGGTATTTCTGGTGATCTTCCCCCATTTGATCATTCCTGCGAATCAATTTCAGTTATTGATCTAGACAGCAATAACTTATCTGGAATCATCCCAAACAGTGTTTCCAAATGTCAAGCTCTCGAGAAAATCAATCTATCCAACAATAATTTGACAGGTCATATACCTAATGAGCTTGCCAGTATTCCTGTTCTTGGTGTCGTGGACCTATCAAATAACAAGTTCACTGGCCCCATACCTGCCAAGTTTGGTAGTTCTTCAAGTTTACAACTTCTCAATGTCTCTTTCAACAACATCTCTGGTTCAATACCCTCAGGAAAGTCATTCAAAGTGATGGGAAGCAGTGCATTTGTGGGAAATTCAGAGCTGTGTGGAGTACCCCTGCGACCATGTCCTGATTCAGTTGGAATATTGGGAAGCAAAGGCACGTGGAAGGTTACACGTATTGTGCTACTCTCTGTAGGGGTGCTAATAGTCCTTTTGGGAATTTCTTTTGGAATATTTTATTTGAGAAGGGGAATTAAAAGTCAATGGAAGATGGTCTCATTCGCGGGTCTCCCTCAATTCACAGCGAATGATGTTTTGACAAGCCTCAGTGCAACAAAACCTGCAGAAGTTCCATCACCATCTCCTGAAGTTACAAAGACTGTTCTGCCGACGGGAATAACAGTTTTGGTGAAGAAGATTGAATGGGAAGTGAGGAACGTGAAGGTGGTGTCAGAATTTATAACGAGACTGGGAAATGCAAGGCACAAGAATTTGATCAGACTGTTGGGGTTTTGCCACAACCAGCATCTAGTCTATCTGTTGTATGATCACTTGCCCAATGGGAATTTGGCTGAGAAAATTGAAATGAAATGGGATTGGGCAGCAAAATTCAGAACAGTGGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTACCCAGCTATACCCCATGGAGACTTGAAGCCTATTAACATTGTATTTGACGAAAATATGGAACCCCATTTGGCAGAATTTGGGTTCAAACAAGTGTTGAGGTGGAGCAAAGACTCATCACCCACCACAACCAAGTGGGAAACAGAATACGATGAAGCCACGAAAGAGGAACTGTGCCTGGATATCTACAAATTTGGGGAGATGATTCTGGAAATTTTAACCGGAGGAAGGTTGACAAATGCAGGAGCCAGCATACACAGCAAACCATGGGATGTTCTCTTTAGAGAAATTTACAATGAGAATGAAGCAAGTTCATTGCAAGAGATTAAACTGGTTCTAGAGGTTGCTATGCTTTGCACCAGAAGCAGGTCATTGGATCGGCCATCCATGGAAGATGTTCTTAAGCTTCTGTCAGGACTAAAGCATCTAGATGATGGCAGAACTTCGAAAGAAGGGCAATGA 2868 0.4285 MEIFKGFYINLLLIFMLSAVAAIDPYSEALLSLKSELVDDDNTLHNWMVPSGGKLSGKSYACSWSGIKCNNDSTIVTSIDLSMKKLEGVLSGKQFSIFTNVTSLNLSYNIFSGQLPAEIFNLTGLTSLDISRNNFSGPFPGGIPRLQNLLVLDAFSNSFSGPLPAEFSQLANLKVLNLAGSYFKGSIPPEYGSFKSLEFLHLAGNSLTGSIPPELGNLKTVTHMEIGYNLYQGFIPPQLGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSLFLFRNQLTGSIPSELSNIESLTDLDLSVNFLSGSIPESFSELENLRLLSLMYNDMSGTVPKGIAQLPSLETLLIWNNRFSGSLPESLGRNSKLKWVDVSTNNFVGSIPPDICVSGVLFKLILFSNKFTGGLSSIYNCSSLVRLRLEDNSFSGEISLKFGHLPDILYIDLSRNNFVGGIPSDISQATQLEYVNVSYNMKLGGIIPPQMWSLPQLQNFSASTCGISGDLPPFDHSCESISVIDLDSNNLSGIIPNSVSKCQALEKINLSNNNLTGHIPNELASIPVLGVVDLSNNKFTGPIPAKFGSSSSLQLLNVSFNNISGSIPSGKSFKVMGSSAFVGNSELCGVPLRPCPDSVGILGSKGTWKVTRIVLLSVGVLIVLLGISFGIFYLRRGIKSQWKMVSFAGLPQFTANDVLTSLSATKPAEVPSPSPEVTKTVLPTGITVLVKKIEWEVRNVKVVSEFITRLGNARHKNLIRLLGFCHNQHLVYLLYDHLPNGNLAEKIEMKWDWAAKFRTVVGIARGLCFLHHECYPAIPHGDLKPINIVFDENMEPHLAEFGFKQVLRWSKDSSPTTTKWETEYDEATKEELCLDIYKFGEMILEILTGGRLTNAGASIHSKPWDVLFREIYNENEASSLQEIKLVLEVAMLCTRSRSLDRPSMEDVLKLLSGLKHLDDGRTSKEGQ 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00675 955 Gene3D Transferase(Phosphotransferase) domain 1 766 953 - -
Cca09g00675 955 SUPERFAMILY Protein kinase-like (PK-like) 705 943 IPR011009 -
Cca09g00675 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Cca09g00675 955 SUPERFAMILY RNI-like 307 597 - -
Cca09g00675 955 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Cca09g00675 955 Pfam Leucine rich repeat 509 567 IPR001611 GO:0005515
Cca09g00675 955 PANTHER UNNAMED PRODUCT 8 944 - -
Cca09g00675 955 Gene3D Phosphorylase Kinase; domain 1 702 765 - -
Cca09g00675 955 SMART serkin_6 681 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00675 955 Pfam Leucine rich repeat N-terminal domain 28 70 IPR013210 -
Cca09g00675 955 Gene3D Ribonuclease Inhibitor 505 623 IPR032675 -
Cca09g00675 955 Gene3D Ribonuclease Inhibitor 278 385 IPR032675 -
Cca09g00675 955 Gene3D Ribonuclease Inhibitor 386 503 IPR032675 -
Cca09g00675 955 SUPERFAMILY RNI-like 78 400 - -
Cca09g00675 955 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 8 944 - -
Cca09g00675 955 Pfam Protein kinase domain 711 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00675 955 ProSiteProfiles Protein kinase domain profile. 670 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00675 955 Gene3D Ribonuclease Inhibitor 181 277 IPR032675 -
Cca09g00675 955 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Cca09g00675 955 SMART LRR_typ_2 98 122 IPR003591 -
Cca09g00675 955 SMART LRR_typ_2 194 218 IPR003591 -
Cca09g00675 955 SMART LRR_typ_2 338 362 IPR003591 -
Cca09g00675 955 SMART LRR_typ_2 266 290 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00675 Cca-Chr9 19261464 19265023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00675 13 940 Receptor kinase-like Gene Family AT5G51350 54.719 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Cca09g00675 Pkinase 1.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00675 - - gmx:100782323 1664.82