Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00658 ATGGCTCTTAGGTTGTCTTCTATTAAACTGGCTTTTGAAGATGTTGGAGACTGGTCCTATGGCAACAGTAACAAAGTATATGGTAAATGGTTCTCTAAGAAATGCATTGCAGAAGAATGGAATCTTGACAAGCACAAGCTTTTTTTGATTGTGATGGATGTAGCCTCTGGTATGGAGTACTTGCATGGAAACAACATAGTACACTTTAACTTAAAAAGTGACAACTTGCTTGTGAATCTCTTAGATCCACACCACCCAATATGCAAGGTTGACGAGTTTTGTATTAGTATTGTCATGTGGGAACTCCTCACGGGAACGAAGAGCCATAACCCATATGCTGATTTGCACTATGGGGCCATCATAGGTGGAATAACAACACCTTACGACCTCCAGTTCCAGAATCCTGTGATCCAGAATGGAGATTGCTGA 429 0.4103 MALRLSSIKLAFEDVGDWSYGNSNKVYGKWFSKKCIAEEWNLDKHKLFLIVMDVASGMEYLHGNNIVHFNLKSDNLLVNLLDPHHPICKVDEFCISIVMWELLTGTKSHNPYADLHYGAIIGGITTPYDLQFQNPVIQNGDC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00658 142 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 38 90 - -
Cca09g00658 142 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 89 124 - -
Cca09g00658 142 PANTHER SERINE-THREONINE PROTEIN KINASE 89 124 - -
Cca09g00658 142 Gene3D Transferase(Phosphotransferase) domain 1 33 137 - -
Cca09g00658 142 PANTHER SERINE-THREONINE PROTEIN KINASE 38 90 - -
Cca09g00658 142 SUPERFAMILY Protein kinase-like (PK-like) 40 113 IPR011009 -
Cca09g00658 142 Pfam Protein tyrosine and serine/threonine kinase 39 96 IPR001245 GO:0004672|GO:0006468
Cca09g00658 142 ProSiteProfiles Protein kinase domain profile. 1 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00658 Cca-Chr9 18902877 18905750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00658 41 126 MAP Kinase Kinase Kinase AT3G46920 47.244 5.70e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Cca09g00658 PK_Tyr_Ser-Thr 1.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00658 - - egr:104436151 114.39