LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca09g00652	ATGATCATGGGACACCAAAAACCTGCATGGTTGGAAGCTCTTTATGCAGAAAAGTTCTTTGTGGGGTGCTCTCACCATGAGAATGCAAAAAAGAATGAGAAGAACATATGCTGCTTAGATTGTTGTACTAGTATTTGTCCCCACTGTTTGCCATCTCATCGCTTCCATAGGCTTCTTCAGGTTCGCCGTTACGTTTATCATGATGTTGTCAGATTGGAAGATCTTCACAAACTCATAGATTGCTCTAATGTCCAGGCTTATACCATCAACAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCACAAAACCGACAATTCAAGGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTAGGATGCAAGGTGGATTTTGTGGTGAAACACTACAAGGACCTCTCTCCCTATTTGAGAACATGCAAGTCCTTGCAGCTAAGTCCTGATTTCCTGATCCCACAAGAGAACATGGGTGATGATGAGATGAGTCGTTCAACCATTGTGGACTGTGATGAGCCAATGAGCTCGTCCTCAGGCTCAGAAGCTTGCACAGAGATTGTTAGAAAAAAGCGTAGTGGGTGGAATGTGTGTGCAAGATCAATGACCAACAAGGTTTTGGTTCATCAAGACATGGCTACCAGCATGATCAGTAGAAGGAAAGGCATCCCTCATAGATCTCCTTTGTGTTAA	717	0.4379	MIMGHQKPAWLEALYAEKFFVGCSHHENAKKNEKNICCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLHKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVVKHYKDLSPYLRTCKSLQLSPDFLIPQENMGDDEMSRSTIVDCDEPMSSSSGSEACTEIVRKKRSGWNVCARSMTNKVLVHQDMATSMISRRKGIPHRSPLC	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca09g00652	238	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	3	238	-	-
	Cca09g00652	238	Pfam	PLATZ transcription factor	62	133	IPR006734	-
	Cca09g00652	238	PANTHER	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	3	238	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Cca09g00652	Cca-Chr9	18672577	18675086	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	PLATZ	Cca09g00652		PLATZ	7.2e-26	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca09g00652	-		-	gmx:100810461	450.284