Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00630 ATGATGGGTGAGAAAAGCAAAAGGGGCAGCGGCGAGGGGATTAACACGACGCTGCTCCACGGGAAGTACGAGTTGGGCCGGTTGTTGGGCCACGGGACGTTCGCGAAGGTGTACCACGCGCGGAACCTGAAGAGCGGAAAGAGCGTGGCGATGAAGGTGGTGGGGAAGGAGAAAGTGATGAAGGTAGGCATGATGGAGCAGATAAAGCGAGAGATCTCAGCGATGAACATGGTGAAGCACCCGAACATCGTGCAACTGCACGAGGTAATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGCTCGTGCGCGGCGGCGAGCTTTTCAACAAGATCGCCCGCGGCCGCCTCCGGGAGGAAACCGCCAGGCTCTACTTCCAGCAGCTCATCTCCGCCGTCGACTTCTGCCACAGCCGCGGCGTCTTCCACCGCGACCTCAAGCCGGAGAATCTCCTCCTCGACGAGGACGGCAACCTCAAGGTCACCGACTTCGGTCTCAGCACGTTCTCGGAGCACCTCCGCCACGACGGCCTCCTCCACACCACGTGCGGCACGCCGGCCTACGTGGCGCCGGAGGTCATCGGCAAAAAAGGCTACGACGGCGCCAAGGCCGATATTTGGTCCTGCGGCGTAATCCTCTACGTCCTCCTCGCCGGCTTTTTACCCTTCCAAGACGACAACTTGGTGGCCTTGTATAAGAAAATTTACCGCGGTGACTTCAAGTGCCCACCCTGGTTTTCTTCCGACGCTCGCCGACTCATCACCAAGCTCCTCGACCCGAACCCGAATACCCGAGTCACCATCTCCAAGGTCATGGACTCGTCCTGGTTTAAAAAACCGGTTCCCATGGTGGGACCCAGGAGAGACGAACGGGAACTGAAACTCGACCCGGAGGAGTCTAGTTCCATGAAGGAGTCCACCATGAACGCCTTTCACATAATTTCGCTCTCGGAGGGGTTCAATTTGTCGCCGCTGTTCgaggagaagaagaaggaggagaaggagATTCGGTTCGCGACGACGCGCCCCGCGAGTAGCGTGATTTCGCGACTGGAGGAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAAGAGTGAGACGAAGGTGACGTTGCAGGGTCAGGAGCGGGGGCGGAAAGGGAAGCTGGCAATTGCTGCGGATTTGTACGCCGTTACGCCGTCGTTTTTGGTGGTGGAGGTTAAGAAGGACAATGGTGACACCTTGGAGTATAACCAGTTCTGCAGCAACGAGCTTCGTCCCGCGCTTAAAGACATCGTCTGGCGGAATTCTCCTGCCGAGAATCCGACACCTGCTTGA 1317 0.5702 MMGEKSKRGSGEGINTTLLHGKYELGRLLGHGTFAKVYHARNLKSGKSVAMKVVGKEKVMKVGMMEQIKREISAMNMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKIARGRLREETARLYFQQLISAVDFCHSRGVFHRDLKPENLLLDEDGNLKVTDFGLSTFSEHLRHDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVALYKKIYRGDFKCPPWFSSDARRLITKLLDPNPNTRVTISKVMDSSWFKKPVPMVGPRRDERELKLDPEESSSMKESTMNAFHIISLSEGFNLSPLFEEKKKEEKEIRFATTRPASSVISRLEEVAKAVKFDVKKSETKVTLQGQERGRKGKLAIAADLYAVTPSFLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWRNSPAENPTPA 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00630 438 PANTHER - 15 433 - -
Cca09g00630 438 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00630 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Cca09g00630 438 ProSitePatterns Protein kinases ATP-binding region signature. 29 56 IPR017441 GO:0005524
Cca09g00630 438 Gene3D Transferase(Phosphotransferase) domain 1 105 281 - -
Cca09g00630 438 SUPERFAMILY Protein kinase-like (PK-like) 20 304 IPR011009 -
Cca09g00630 438 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00630 438 CDD STKc_SnRK3 22 276 - -
Cca09g00630 438 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 433 - -
Cca09g00630 438 Pfam NAF domain 306 364 IPR004041 GO:0007165
Cca09g00630 438 Gene3D Kinase associated domain 1, KA1 302 428 - -
Cca09g00630 438 CDD CIPK_C 309 423 - -
Cca09g00630 438 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00630 438 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Cca09g00630 438 Gene3D Phosphorylase Kinase; domain 1 20 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00630 Cca-Chr9 17719599 17722029 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00630 1 432 CBL-interacting serine-threonine protein kinases AT4G30960 73.923 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca09g00630 Pkinase 1.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00630 - K07198 gmx:100806762 771.926