Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00627 ATGAAATACTTATGCTTTTTTGGCTCTGCCATATCAACTAAGACAGGAACATCCGTCTTGGTAACATCAACTTATTGGTCTCCGGTTGTGAAAAGATTTGGAAGATTGAAGTCGATTCCCGCGAGCACAGCCTTAACGACGGCAAGGAAATACATACCCAGTAACCCAGGAGTAAAAGAAGAGACATGGGAAGCCTTTATAGTTGATGCACTTTTCCTTGCCAAGAGTGAGGTTGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACAGTGGAAGTGCGGAGACCAGGTGGCGAGACTATTATGGGAGACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTACAGCAGTTGGCTGACAAGCTATTGAGCTATTGCAgatatatctactgcattgtcaaagaacttagaatggatttaccccatgagttataa 447 0.387 MKYLCFFGSAISTKTGTSVLVTSTYWSPVVKRFGRLKSIPASTALTTARKYIPSNPGVKEETWEAFIVDALFLAKSEVAAGSINLNGTLTVEVRRPGGETIMGDIVRLVEEAQSREAPVQQLADKLLSYCRYIYCIVKELRMDLPHEL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00627 148 Pfam E1-E2 ATPase 74 131 - -
Cca09g00627 148 Gene3D - 10 113 - -
Cca09g00627 148 PANTHER ATP7, ISOFORM B 75 133 - -
Cca09g00627 148 SUPERFAMILY Calcium ATPase, transduction domain A 66 109 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00627 Cca-Chr9 17286313 17293925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00627 78 129 Primary Pumps ATPases AT1G63440 50.000 1.00e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00627 K17686 - ming:122071912 95.9005