Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00620 ATGCCCAATCGCTGTGAAATATGCTGTGAGATTATGATAGCCATCTTACTCCCTCCAATTGGAGTTTGCTTTCGCCATGGATGCTGCAGTGTGGAGTTCATGATCTGCTTGCTCCTGACCATACTTGGGTATATTCCAGGAATAATTTATGCCCTGTATGCTATTGTCTTCATTGATCGTGATCAGTATTTTGATGAATATAGGCGTCCACTGTATTCAGCGTAA 225 0.4222 MPNRCEICCEIMIAILLPPIGVCFRHGCCSVEFMICLLLTILGYIPGIIYALYAIVFIDRDQYFDEYRRPLYSA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00620 74 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016021
Cca09g00620 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 74 IPR000612 GO:0016021
Cca09g00620 74 PANTHER BNAA03G50460D PROTEIN 1 74 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00620 1 74 RCI2 Gene Family AT4G28088 79.730 1.03e-41 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00620 - - gmx:100306426 152.14