Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00603 ATGGGCATTGGCGAAGAAGCAAGAACTCGAAGTTGCAAAGAAGAAGAGAGCCGAGAGCCAAAGCTCATCTACAACAGAGCCAAGCAGTACGCGATGGAGTACAATGAGCAGGAGAAGGAATTGATTAGGTTGAAGTGTGAGGCCAAGTTGACAGGTGGATTTTATGTGGATCTAGAGGCTAAGCTtgatggaggaccatccttggtacttcacttcatgtga 222 0.3919 MGIGEEARTRSCKEEESREPKLIYNRAKQYAMEYNEQEKELIRLKCEAKLTGGFYVDLEAKLDGGPSLVLHFM 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00603 73 PANTHER 60S RIBOSOMAL PROTEIN L7 10 62 IPR039699 -
Cca09g00603 73 Coils Coil 27 47 - -
Cca09g00603 73 Pfam Ribosomal L30 N-terminal domain 8 57 IPR012988 -
Cca09g00603 73 PANTHER 60S RIBOSOMAL PROTEIN L7 10 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00603 Cca-Chr9 16466786 16467007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00603 11 62 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 63.462 6.07e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00603 K02937 - egr:104428813 75.8701