Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00598 ATGAGGAACATGATGCGAAAATTGTTGTTCAGAAAGCCCCCCGATGGCCTTCTCGAGATCTCTGACAGAATCTACGTTTTCAATTGCTGTTACGGCGCGCAACACGAATGGGGTGAGCAGCGTTACAAGCAATACGTGGAAAAGGTTCTCCGTCAGTTTCGAAAGAGCGCGCCCGAGGCTTCCATTTTGGTGTGCAACTTCCGCGACGAGGAGACCAGAGCGAGGGCGTTCGATCACGTTACTCTCGTGGACTACCCTCGCCACCACCTCGGTTGCCCCGTGCTCAAAGCGGAGGACACGTGGCGCTTCCTGAGGTCCTGCGACACCTGGCTCTCGCGCGGCCGCCGCGACGTCGTTTTGATGCACTGCGAGCGAGGCGCGTGGCCCGTTTTGGCGTTCGCGCTTGCCGCGTTGTTGCTGTTTCGGAAACAGTGCGAGGGAGAGAAACGGGCGCTGGATACGGTTTACGAACTGGCGCCGAGGCAGCTTTTGCATTCGTTGATGGCAGTGAACCAGATTCCGTCGCAGTTGAGGTATCTGAGATACGTTGCCACGTGTAACGGGACGTTGGATTCGGTTACGTTGAGCAGAGTGGTGAGGTTGGACTGCGTCGTTCTCAGGTTTATGCCGAAGTTTGGTGGCGAAGGTGGTGGCGCTCCGGTGTTGAGAATTTATGGACGGGATCCTTTTGTTGAGCATGGGAATGGGAATCCCAAATTGCTACACTCCACAAATGAGACAAGAAAAAATCCCCGGGAATGCCAACAGGGAGACCGTGACACAATTAAAGTCGATATTAATTGTCATATTAAAGGTGATGTCCTTATTGAGAGCATTGACTTGAATGGTGACACAAAGAGTGAGCAGATAATGTTCCGAGTCATGCTCAATGCAGCTTTTATGGGATCTAATGTATTACTTAACCGTGACAAAATTGATGTTTTATGGTGTGCTAAAGATCACTTCCCAAAGGATTTCAGGGCAGAGATTCTTTTCTCAGAAATGGATGCTTCTACAGCTGTTAGTAAGAAGAGCACCTCGTGCTTTGAGCAGAAGGAAGGAATTCCAATTGAAGCATTTTCCAAAGTTCAAGAAGACCTGATGAATCCCATGGAAGCTCCTACACCAAATGTGCTCAAACATAAGTGTGCTTCACCTAACAATACCATACATGAAATGTTGAATACAGGCTTAAATGAGAATGTGGAGAGCGGTAGCCTTTCGCTTAGAAAAGGTCCTCAAATGGCTCAGGAAAAAAAGAATGAAGAAAATTGCTTCTTGTCTTCAAATATGGAAAACCAGTTTGTGACCTCAGTTAAGCAGTCATCAGATAACAATGTGAGTAGAAAAGAGGAGAAGTCCATCAAAGCTGATGCTACTCCACCACAGCCGAGTAAGTCTGACATCATCGGAAAGGAAATGCCTGGTCCTTTGGAAAGAACTTCAGAGTCTGACAACTGTGTAACAGGTTGTACAGATCTTTCAATTAAAATACCATCTAATTTGGCGGACACTTCTTCTAGTGGTACAATTTCACCCCAAACACCTTCGCCATTGCCTCCCTTGACTAGGAGTGTCAAAGAAGTTCATGATTCTCATCCTCACAAGGATTCACATTTCCATCATGATTCACCTTCGAAGGAAAGATATCCTACTGAAGAAACTAAATCCCAATCTCAAGATAGAAGTCAGTCATGTGCTTTTCAGAATAAGTCACCAGATGATTCAGATGCCCAGCCTCTGGCTTCTGCAATTACAATTACATCAAAAATTCAACCGCCCCCTCTAAAGAAGATTTTACCTATTAAAACAAAACTTGATTCTTCCCTTTCACAACCTCAAACACCGCCACTTCATCCTACTCATGAAGCAATTAGAGCAAGACCTCTTGCATCCCCAACAACTCCTCCTCTAAAGGAACATGAACAAATTAAAACAAGACCTCATGCATCCCCAGCAACTCCTCCTCTAAAGGAACACGAACAAATTAAAACAAGACCTCATGGATCCCCAACAACTCCTCCCACTCCTCCACTAAAGGAACATGAATCAATTAGAGCAAGACCTCATGCATCCCCAACAACTCCTCTCACTCCTCCACTGAAAGAACATGAACCAATTAGAGCAATACCTAATGCATCTCCACGAACTCCTCCAGCAAAGGAACATGAACCAATTAGAGTAAAACCTCATTCATCCCCATCAACTCCTCCCACTCCTCCACGAAAGGAATATGAACAAATTAGAGTAAGACTTGATTCATCCCCATCAACTCCTCCCACTCCTCCACTAAAGGAACATGAAGCAATTAATGCAAGACCTCATGCGTCTCCAACAACACCTCCAATAAAGGAACATAAACCAATTAGAGCAAGACTTCATTCATCCCCAACAACTCCTCCCACTCCTCCATTGAAGGAACATGAATCAATTAGAGTAAGACTTCATTCATCCCCATCAACTCCTCCAACTCCTCCACTAAAGGAACATGAACCAATTAAAGTAAGACTTCATTCATCCCCATCAACTCCTCCCACTCCTCCATTAAAGGAACATGAACCAATTAGAGTTAGACTTTATTCATTCCCATCAACTCCTCCCACTCCTAAACCAAAGGAAGAAGAAGCAATTAGAGCAGGACCTCATGCATACCCACCAACTCCTCCCACTCCTCCAATAAAGGAACATGAACCAATTAGAGTAAGACTTCATTCATCCCCACGAACTCCTACAACTCCTCCACTAAAGGAACACGAACCAAGTAGAGCTGGAGCTCCACCATCCCCACCAACTCCTTCTCCAAATCCAAAGGATGAAAGACTTATCAATTCTGGAGCCcctcctccccctcctactccacctccATGTCCTTCCAAAAAAGCTTCAAGTCCAACTTTATCACCACCGATACCGCCACCTCCTCCTCCCGCCACTACACTTTCCTCTGATCACTTTGATTCATCCGTTCCTGCTGCTCCACCACCTCCAGGTTCCTTTTGTAAAGGAGGTATACAAGAAGACAATGGTTTTACGCGGTCACTTTCCATGGGTGCTGGAGGACATAATGTGTCAAGCACAGGGCATTCATCTATTTCATCCGTTGGCTCTAGAAAGGGACGATTTCTATCACATTCAAATTCAATGGGTCAAACCAAAAAATTGAAGATGTTGCATTGGTTGAAACTGTCTAGAGCAGTGAAAGGAAGTTTGTGGGCAGAGACACAAAAATCTGGTGAAAATTCCAAAGCTCCAGAGATTGATATGTCAGAGCTTGAAAGTCTTTTCTCAACTGCTGTCCCAAGTTCAGGCTCTTCCAGAAAAACAAATGCGAAAAGCTCTCTTGCGCCAAAATCTGATAAAGTGCAACTGATTGAGCATACACGAGCGTATAATTGTGAAATCGTTCTTTCAAAAGTGAAAGTGCCATTGCATGATTTAATGAGATCAGTGTTAGCACTAGAAGAATCTGCATTAGACATTGATCAAGTTGAGAACCTGATCAAATTTTGTCCTACAAAAGAGGAGATAAAAGTACTCAAGGGCTATACCGGAGAAAAGGAGAAGCTTGGGAGGTGTGAACAGTTCTTCTTGGAGTTGATGAAAGTTCCGCGCGTAGAATCCAAACTTAAAGTCTTTTCATTCAAGATTCAGTTTAACTCTAGGGTTTCTGACCTTAGAAATAGCCTAACTGTAGTGAATGCGGTTTCAGAAGAGATTAGGAATTCTGTCAAATTAAAGAGAATCATGCAAACAGTACTTTCCCTAGGAAACGCTTTGAACCAGGGTACTGCCAAGGGCTCTGCTATTGGATTCAAATTGGATAGTCTTCTTAAACTCACTGAGACACGTGCACAAAACAAGAAGATAACTCTAATGCATTACCTTTGTAAGATTCTAGCTGATAAATTACCAGAAGTTTTAGATTTCTCAAAGGATCTTGCTAACCTCCCTCTAGCAGCAAAGATCCAATTGACATTGTTGGCAGAGGAAAAACAAGCTATAAGCAAAGGACTAGAGAAACTTGAACATGAACAATCCACCTCTGAAAATGATGGTCTTGTATCAGAAACTTTTTGCAAGAAGTTGAAAGAGTACCTCTATTCTGCGAAGGCCGAAGTCTCTTCATTGTCTTCACTATATTCTATCATGGGAAGGAATGTAGAAGCTTTGATTATTTATTTTGGTGAAGATCCATGTCGTTGTCCTTTTGAGCAAGGTATGTGA 4224 0.4354 MRNMMRKLLFRKPPDGLLEISDRIYVFNCCYGAQHEWGEQRYKQYVEKVLRQFRKSAPEASILVCNFRDEETRARAFDHVTLVDYPRHHLGCPVLKAEDTWRFLRSCDTWLSRGRRDVVLMHCERGAWPVLAFALAALLLFRKQCEGEKRALDTVYELAPRQLLHSLMAVNQIPSQLRYLRYVATCNGTLDSVTLSRVVRLDCVVLRFMPKFGGEGGGAPVLRIYGRDPFVEHGNGNPKLLHSTNETRKNPRECQQGDRDTIKVDINCHIKGDVLIESIDLNGDTKSEQIMFRVMLNAAFMGSNVLLNRDKIDVLWCAKDHFPKDFRAEILFSEMDASTAVSKKSTSCFEQKEGIPIEAFSKVQEDLMNPMEAPTPNVLKHKCASPNNTIHEMLNTGLNENVESGSLSLRKGPQMAQEKKNEENCFLSSNMENQFVTSVKQSSDNNVSRKEEKSIKADATPPQPSKSDIIGKEMPGPLERTSESDNCVTGCTDLSIKIPSNLADTSSSGTISPQTPSPLPPLTRSVKEVHDSHPHKDSHFHHDSPSKERYPTEETKSQSQDRSQSCAFQNKSPDDSDAQPLASAITITSKIQPPPLKKILPIKTKLDSSLSQPQTPPLHPTHEAIRARPLASPTTPPLKEHEQIKTRPHASPATPPLKEHEQIKTRPHGSPTTPPTPPLKEHESIRARPHASPTTPLTPPLKEHEPIRAIPNASPRTPPAKEHEPIRVKPHSSPSTPPTPPRKEYEQIRVRLDSSPSTPPTPPLKEHEAINARPHASPTTPPIKEHKPIRARLHSSPTTPPTPPLKEHESIRVRLHSSPSTPPTPPLKEHEPIKVRLHSSPSTPPTPPLKEHEPIRVRLYSFPSTPPTPKPKEEEAIRAGPHAYPPTPPTPPIKEHEPIRVRLHSSPRTPTTPPLKEHEPSRAGAPPSPPTPSPNPKDERLINSGAPPPPPTPPPCPSKKASSPTLSPPIPPPPPPATTLSSDHFDSSVPAAPPPPGSFCKGGIQEDNGFTRSLSMGAGGHNVSSTGHSSISSVGSRKGRFLSHSNSMGQTKKLKMLHWLKLSRAVKGSLWAETQKSGENSKAPEIDMSELESLFSTAVPSSGSSRKTNAKSSLAPKSDKVQLIEHTRAYNCEIVLSKVKVPLHDLMRSVLALEESALDIDQVENLIKFCPTKEEIKVLKGYTGEKEKLGRCEQFFLELMKVPRVESKLKVFSFKIQFNSRVSDLRNSLTVVNAVSEEIRNSVKLKRIMQTVLSLGNALNQGTAKGSAIGFKLDSLLKLTETRAQNKKITLMHYLCKILADKLPEVLDFSKDLANLPLAAKIQLTLLAEEKQAISKGLEKLEHEQSTSENDGLVSETFCKKLKEYLYSAKAEVSSLSSLYSIMGRNVEALIIYFGEDPCRCPFEQGM 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00598 1407 MobiDBLite consensus disorder prediction 1008 1038 - -
Cca09g00598 1407 ProSiteProfiles C2 tensin-type domain profile. 196 335 IPR014020 -
Cca09g00598 1407 PANTHER FORMIN-LIKE PROTEIN 832 1405 - -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 236 256 - -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 557 579 - -
Cca09g00598 1407 PANTHER FORMIN-J 4 397 - -
Cca09g00598 1407 PANTHER FORMIN-J 832 1405 - -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 943 979 - -
Cca09g00598 1407 PANTHER FORMIN-LIKE PROTEIN 4 397 - -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 607 1038 - -
Cca09g00598 1407 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 183 IPR029021 -
Cca09g00598 1407 Gene3D - 197 338 - -
Cca09g00598 1407 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 335 IPR035892 -
Cca09g00598 1407 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1057 1398 - -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 502 579 - -
Cca09g00598 1407 Pfam Formin Homology 2 Domain 1049 1404 IPR015425 -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 438 486 - -
Cca09g00598 1407 SMART PTEN_C2_2 194 334 IPR014020 -
Cca09g00598 1407 Coils Coil 1324 1344 - -
Cca09g00598 1407 SMART it6_source 586 1405 IPR015425 -
Cca09g00598 1407 Gene3D Protein tyrosine phosphatase superfamily 16 196 IPR029021 -
Cca09g00598 1407 Gene3D Formin, FH2 domain 1041 1406 IPR042201 -
Cca09g00598 1407 Pfam C2 domain of PTEN tumour-suppressor protein 197 334 IPR014020 -
Cca09g00598 1407 MobiDBLite consensus disorder prediction 526 556 - -
Cca09g00598 1407 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1044 1407 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00598 Cca-Chr9 16108812 16141866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00598 4 365 Protein tyrosine phosphatase (PTP) family AT5G58160 50.000 2.97e-115 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00598 - - ccaj:109789567 2635.91