Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g00578 | ATGCCAGATTTGGGAAACTTATCTTTCTCTGCGACTCTCACTCTCTCTCACTGCTCCTCCGATGTCGCCGACGCTCCCGTCAAAACCCTACCCGATGCCTTCGGTTCCGACCCTCCCTTCGAGCCTCGCGTTTTGAAGCGCACCCGCGGCTCCCTCGATCGAGTCACCGACACGCCCTTCCAGGATCGCCTCAAACACCCCTTCCCTCTTCCATTTCTCGTTGGCGCTCCCAAGATGAGTGAATGTTGCTTTTGCCGCCATTTTATCGACCCTGGGGAGGAGCTCTTGTGTTCTGTCCGCGGATGCGACGCGCCCTACCATTTGGATTGTGCAAAAGAAGCTGTTGGGCCTTCCAGTCTGAAGAAATTCAAGTGTCCACAGCATGTATGCTTCATTTGCAAGAAAAATAAGAACTTGAGGTGTGTGTGTTGTAATATTGCATTCCACAGTAAATGTTCACCATGGCCAGATGCAGTGTTGCATCTAAAAGATCATCCTGGGAAAGCTGTTTGTTGGAGGCATCCTTCTGATTGGCGTCTGGATAGAAAGCATGATGCTTCAACAAGTGATATTTCGGAGGTATTTTGTCGCTTGCCTCTTCCATTCATCAGTGAGGAGTTTAAGATTGACTTCAATTGGAAAGATATGGACAGTAAGATGGAGCAACCACCACCATATGTACACATAAGGCGCAATATATACTTAGTAAAGAAGAAACGTAGTGACGTGGATGATGGTGCAGGGTGCACAAGTTGCAGTTCTACATGTTCTGATGATTGTGTGTGCAGGGTTCAATGCATAAGCTGCTCAAAGGCTTGTCACTGTTCAGAAAATTGCAATAATCGGCCATTTCGCAAGGAGAGAAAGATCAAGATTGTTAAGACTGAACTTTGTGGATGGGGAGTGGAGGCCGCTGAAACAATCGGTAAAGGTGGATTTATAATTGAGTATATTGGAGAAGTCATTGACGATGCCTTATGTGAAAAAAGGCTTTGGGACATGAAATACAGAGGGGTACAGAATTTTTACATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACATTCAAAGGAAATACTTCACGCTTTTTGAACCATAGCTGTGATCCCAACTGTGTTTTGGAAAAGTGGCAAGTTGATGGTGAAACACGTGTGGGTGTATTTGCTGCTCGTTCCATAAAAGCTGGAGAGCCGTTAACATATGATTACAGATTTGTGCAATTTGGTCCAGAGGTGAAATGCTACTGTGGCGCAGCAAATTGTCAAGGCTTTCTAGGGACGAAAAAGAAAATTGGGAAGCTGGAACTCTGTTGGGGTTCAAAACTGAAAATCAGCCATGAAGGGATGGATGAGTGA | 1359 | 0.4555 | MPDLGNLSFSATLTLSHCSSDVADAPVKTLPDAFGSDPPFEPRVLKRTRGSLDRVTDTPFQDRLKHPFPLPFLVGAPKMSECCFCRHFIDPGEELLCSVRGCDAPYHLDCAKEAVGPSSLKKFKCPQHVCFICKKNKNLRCVCCNIAFHSKCSPWPDAVLHLKDHPGKAVCWRHPSDWRLDRKHDASTSDISEVFCRLPLPFISEEFKIDFNWKDMDSKMEQPPPYVHIRRNIYLVKKKRSDVDDGAGCTSCSSTCSDDCVCRVQCISCSKACHCSENCNNRPFRKERKIKIVKTELCGWGVEAAETIGKGGFIIEYIGEVIDDALCEKRLWDMKYRGVQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIKAGEPLTYDYRFVQFGPEVKCYCGAANCQGFLGTKKKIGKLELCWGSKLKISHEGMDE | 452 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g00578 | 452 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 76 | 177 | IPR013083 | - | |
Cca09g00578 | 452 | ProSiteProfiles | AWS domain profile. | 245 | 288 | IPR006560 | GO:0005634|GO:0018024 | |
Cca09g00578 | 452 | PANTHER | HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 | 69 | 444 | - | - | |
Cca09g00578 | 452 | CDD | SET_ASHR3-like | 289 | 427 | - | - | |
Cca09g00578 | 452 | Gene3D | SET domain | 200 | 436 | IPR046341 | - | |
Cca09g00578 | 452 | ProSiteProfiles | SET domain profile. | 288 | 405 | IPR001214 | GO:0005515 | |
Cca09g00578 | 452 | PANTHER | SET DOMAIN PROTEINS | 69 | 444 | - | - | |
Cca09g00578 | 452 | SMART | PHD_3 | 81 | 129 | IPR001965 | - | |
Cca09g00578 | 452 | SMART | PHD_3 | 130 | 175 | IPR001965 | - | |
Cca09g00578 | 452 | SMART | set_7 | 288 | 411 | IPR001214 | GO:0005515 | |
Cca09g00578 | 452 | Pfam | SET domain | 299 | 404 | IPR001214 | GO:0005515 | |
Cca09g00578 | 452 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 452 | IPR025787 | - | |
Cca09g00578 | 452 | SUPERFAMILY | FYVE/PHD zinc finger | 80 | 135 | IPR011011 | - | |
Cca09g00578 | 452 | SMART | PostSET_3 | 411 | 427 | IPR003616 | - | |
Cca09g00578 | 452 | ProSiteProfiles | Post-SET domain profile. | 411 | 427 | IPR003616 | - | |
Cca09g00578 | 452 | SUPERFAMILY | SET domain | 211 | 417 | IPR046341 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g00578 | Cca-Chr9 | 15295261 | 15307750 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g00578 | 269 | 426 | C2H2 Transcription Factor Family | AT2G23740 | 36.313 | 1.81e-24 | 105 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Cca09g00578 | SET | 1.4e-17 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g00578 | - | - | aprc:113859744 | 799.275 |