Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00575 ATGGGCACCCCTGCCCAGAACCTCTTCAACGACATGCTCATAAAGGGAAGGTCGGTGGTGGTGGAAGCCATTGCTCTTCTAAAGGGCCGGGAACCTGAACCCGACCTCTGGAAGGGGCCTGATGAGACTGGACCTCCTCCCATGGTATTTCTTTTGTTTCAGCTTTTGGAGGAGCTAAATCTGACCATGGACCAATTTATGGATTTATGCATTCTTTCTGGCTGTGATTATTGTGACAGCATTCAAGAGCTTTTGATTTCTGTTCTTGTTCTGGATCAGCAACTTTTATCTAATAACAAATTGGATGAACTTTTTATGCTGATGCACTTCCTCGATGCTGGAAAGGCCGATTTGTATCACCGACTCGGCCGTAGGCCAATTGATATCTCGGACTATAAGGACTACACCTTAAGCATTTTCGCCTTATAG 429 0.4569 MGTPAQNLFNDMLIKGRSVVVEAIALLKGREPEPDLWKGPDETGPPPMVFLLFQLLEELNLTMDQFMDLCILSGCDYCDSIQELLISVLVLDQQLLSNNKLDELFMLMHFLDAGKADLYHRLGRRPIDISDYKDYTLSIFAL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00575 142 Gene3D - 61 86 - -
Cca09g00575 142 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 61 82 IPR036279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00575 Cca-Chr9 15033558 15037310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00575 40 82 Core DNA Replication Machinery Family AT5G26680 65.116 2.96e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00575 K04799 - gmx:100807145 74.3294