Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00552 ATGTTCAGTTTTCAACATAACCAAGTAGAGAACAATATGAAGAAGCTTCCTCTTTATGCTTGTTTACTCAATTTGAGTCTCTTGGTTCTTCTTCCCTACAGCAAAGCCAGTCAGGCTGGTAAACTAAATGAGTTGATTATGTCTAGGAGATCACAGAATCCTCCTGTGACTCTTCCATGGGCGGAGGAAGAAGCATTGAAATCTCATTCTTCTGCTTATGTTGCACCACAAAAGGGGCTGAGCCAAGCTGACAAGATTCTCACATTGCCTGGCCAGCCTTATGGAGTGAATTTTGATCAATATTCAGGTTATGTCACTGTTGATCCAGTGGCTGGAAGAGAACTTTTCTATTATTTTGTGGAGTCTCCATATAACCCCTCGACTAAACCTTTAGTGTTGTGGCTAAATGGAGGACCCGGTTGTTCCTCGTTGGGGTATGGTGCCTTTGAAGAATTGGGACCTTTCAGAATAAACTCTGATGGGAAAACACTTTATCGTAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTGTTCTTGGAATCCCCTGCTGGAGTGGGCTTTTCCTACTCAAACACCACATCTGATTATGAAACACGAGGAGATAACTCAACTGCTAAAGATTCCTATGTTTTCCTCATCAATTGGTTAGAGAGGTTTCCACAGTACAAAACCCATGATTTTTACATCACTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAGCTTGCATACACTATTTTGGTGAACAATAAAATCGGTCACCAAAGTATTAACCTCAAAGGCATTGCTATAGGGAATGCATTGATTGATGAAGCTACAGGTTCAAAGGGAATGGCTGATTATTTATGGACTCATGCTTTGAGCTCGGATGAAACCCACGAGTTGATTGAGAAGTACTGCGATTTTGCATCTGAAAACATTACGGCAGCATGTGACAATGCAACAGAAATGGCTGCGATTGAGAGAGGAAACTTGGACTTCTATAATATCTATGCTCCATTGTGTCACGACCCTTCTCTCAAAAATGGATCAACTGGTTCTGTATATGATTTTGACCCGTGTTCTGATTACTACGGCGAAGCCTATTTTAATAGGCCAGAGGTCCAACTAGCTCTTCATGCAAAACCCACAAACTGGACCCACTGCGGAACTAACAGTAATATTTCGATGAAATGGAACGACAGCCCTACTACCATCCTACCTGCCATCAAGTATCTCATCGGCAGTGACATTGGATTGTGGATATACAGTGGTGATACTGATGCAGCGGTGCCAGTCACATCTTCCAGATATGCAATCAACACCCTCAAGCTCCCTATTCAGGTTCCTTGGCGTGCATGGTATTCTGGAAATGAGGTTGGAGGATTTGTGGTGAAATACAAAGGAGTGACATTTGCTACCGTTAGAGGAGCAGGACATGAGGTTCCAAGCTGGCAACCAGCAAGAGCTCTGACCTTGATCTTCTCGTTCCTCAATGGAAGCCTCCCTCCTGCTTCTCCAGGGAAAGGGTTCTAA 1518 0.4341 MFSFQHNQVENNMKKLPLYACLLNLSLLVLLPYSKASQAGKLNELIMSRRSQNPPVTLPWAEEEALKSHSSAYVAPQKGLSQADKILTLPGQPYGVNFDQYSGYVTVDPVAGRELFYYFVESPYNPSTKPLVLWLNGGPGCSSLGYGAFEELGPFRINSDGKTLYRNKYAWNEVANVLFLESPAGVGFSYSNTTSDYETRGDNSTAKDSYVFLINWLERFPQYKTHDFYITGESYAGHYVPQLAYTILVNNKIGHQSINLKGIAIGNALIDEATGSKGMADYLWTHALSSDETHELIEKYCDFASENITAACDNATEMAAIERGNLDFYNIYAPLCHDPSLKNGSTGSVYDFDPCSDYYGEAYFNRPEVQLALHAKPTNWTHCGTNSNISMKWNDSPTTILPAIKYLIGSDIGLWIYSGDTDAAVPVTSSRYAINTLKLPIQVPWRAWYSGNEVGGFVVKYKGVTFATVRGAGHEVPSWQPARALTLIFSFLNGSLPPASPGKGF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00552 505 Pfam Serine carboxypeptidase 90 494 IPR001563 GO:0004185|GO:0006508
Cca09g00552 505 ProSitePatterns Serine carboxypeptidases, histidine active site. 464 481 IPR033124 GO:0004185
Cca09g00552 505 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 499 IPR001563 GO:0004185|GO:0006508
Cca09g00552 505 Gene3D - 400 494 - -
Cca09g00552 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 179 IPR001563 GO:0004185|GO:0006508
Cca09g00552 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 180 190 IPR001563 GO:0004185|GO:0006508
Cca09g00552 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Cca09g00552 505 PRINTS Carboxypeptidase C serine protease (S10) family signature 464 477 IPR001563 GO:0004185|GO:0006508
Cca09g00552 505 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Cca09g00552 505 PANTHER CARBOXYPEPTIDASE 30 499 - -
Cca09g00552 505 Gene3D - 355 390 - -
Cca09g00552 505 Gene3D alpha/beta hydrolase 81 338 IPR029058 -
Cca09g00552 505 SUPERFAMILY alpha/beta-Hydrolases 87 495 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00552 Cca-Chr9 14181017 14185433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00552 352 495 Calmodulin-binding Proteins AT2G22960 30.065 5.93e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00552 K16297 - gmx:100779407 842.032