Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00538 ATGCCGAGCGTGGCCGTGAAACTCTACAGCGTCTTCTTCAAGTTTCTCCTAAAGCACCGTTTGCAGAACCGGATCCAGGCCCCGCCCGAAGAATCCGACCCGTTCGGAATCACGACCCGACCCGACGAATCCGTCGCCGCCGCGAACCCTTCCTTCTCCGACGGCGTCGCCACCAAAGACATCCACATCGACTCCTTAACCTCTCTCTCCGTCCGAATCTTCCTCCCCGATTCCGCGCTCGCCTCGcccgaaccaaactccaagcctaaccccaaccctaaccGCCGGCCCGAGCCTGGATCCGCCACGCAGGCCGAAGCGGCGTCGTGGCGGCGCTACAGCTACGGGCCCTCGGCTTTGCAGCAGCGCGAGGAGGAGCCGCGGCGGAACAGCCTCAGCGGCGACTCGGAGGGCTCGAATTCGCCGGCGGGCGGGTACCGGGGGTACTCGCCGATGGCGGGGGACGGTCGCCGGAAAAAGTTGCCGGTGGTTTTGCAGTTCCACGGCGGGGGGTGGGTGAGCGGGGGGAACGATTCGGTGGCGAACGATTGCTTCTGCCGGCGGATCGCGAAGCTCTGCGACgcggtggtggtggcggtcgggtaccggctggcgCCGGAGAATCGGTACCCGGCGGCGTTTGAGGATGGGATGAAGGTGCTGAATTGGCTGGCGAAGCAGGCGAATTTGGCGGAGTGTAGTAAGTCTTTGGGGGGGAAGAAGTTGGAGGGTCAGCACAAGCATATTGTTGATTCATTTGGGGCCTCGATGGTTGAGCCTTGGTTGGCTGCTCATGGGAATCCATCAAGATGTGTTCTTCTTGGTGTGAGTTGTGGTGCAAATATTGCAAACTACGTGGCTCGGAAAGCTGTAGAAGCAGGCAATGTGTTTGCTAGCATGGAAACTATTCCTACCAGAGGAAGAGTTTAG 930 0.5591 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPEESDPFGITTRPDESVAAANPSFSDGVATKDIHIDSLTSLSVRIFLPDSALASPEPNSKPNPNPNRRPEPGSATQAEAASWRRYSYGPSALQQREEEPRRNSLSGDSEGSNSPAGGYRGYSPMAGDGRRKKLPVVLQFHGGGWVSGGNDSVANDCFCRRIAKLCDAVVVAVGYRLAPENRYPAAFEDGMKVLNWLAKQANLAECSKSLGGKKLEGQHKHIVDSFGASMVEPWLAAHGNPSRCVLLGVSCGANIANYVARKAVEAGNVFASMETIPTRGRV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00538 309 SUPERFAMILY alpha/beta-Hydrolases 113 294 IPR029058 -
Cca09g00538 309 Pfam alpha/beta hydrolase fold 164 294 IPR013094 GO:0016787
Cca09g00538 309 Gene3D alpha/beta hydrolase 36 307 IPR029058 -
Cca09g00538 309 MobiDBLite consensus disorder prediction 79 152 - -
Cca09g00538 309 PANTHER BNAC09G54450D PROTEIN 27 294 - -
Cca09g00538 309 PANTHER ARYLACETAMIDE DEACETYLASE 27 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00538 Cca-Chr9 13634893 13640898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00538 1 295 Carbohydrate Esterase AT3G27320 63.636 2.71e-126 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00538 - - gmx:100794631 444.506