LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca09g00537	ATGCCTCCAACATTGACAGTGGTGGCAGAACATGACTGGATGAGGGACCGTGCCATTGCTTATTCGGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTTATGAGTATAAAGATGCAGTCCATGAATTTGCCACACTTGACATACTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATCGCCATCTGGGTCAAGAAATACATTTCGCTTCGAGTTCATACCCAAGCCAAACCAGTTTGGCTTGATGGTCTCAATATTGGAAGCACTTTGAGGGAATGGGAGCCACTGGCCCAGTGGGGTATGAACAGGTTGATCAATCTGTCAGATCTTCTGGGCTTATTTGCAAAGGTGGCATCTCTGCTGTGTGTCCTGTAA	384	0.4766	MPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVYEYKDAVHEFATLDILLKSPQAQVCAEDIAIWVKKYISLRVHTQAKPVWLDGLNIGSTLREWEPLAQWGMNRLINLSDLLGLFAKVASLLCVL	127

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca09g00537	127	PANTHER	CARBOXYLESTERASE 16-RELATED	1	62	-	-
	Cca09g00537	127	PANTHER	ARYLACETAMIDE DEACETYLASE	1	62	-	-
	Cca09g00537	127	Gene3D	alpha/beta hydrolase	1	80	IPR029058	-
	Cca09g00537	127	Pfam	alpha/beta hydrolase fold	1	45	IPR013094	GO:0016787
	Cca09g00537	127	SUPERFAMILY	alpha/beta-Hydrolases	2	71	IPR029058	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca09g00537	1	76	Carbohydrate Esterase	AT5G14310	92.105	5.62e-45	149

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca09g00537	-		-	gmx:100809142	154.451

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Cca09g00537	09	13633545	13634834	Cca09g00537	09	13633545	13634834	ECH

Showing 1 to 1 of 1 entries