Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00526 ATGGCTTCTCCTTGTTCCTCTTCCCTACTAGTGCTTCTCTTTGCCATCTTCACCACTCTCCCACGTTTCTCTGTGGCTTCCATTGAGTTCCAAGTTGGTGGCTCAAAAGGGTGGGTTGTCCCACCTGCCAATGACACCAACCACTACAATGATTGGGCTTCCAACAACAGGTTCCACGTTGGTGACACCATCTGGTTTAAGTACAAGAAGGATTCTGTGATGGAAGTGAGAGGGGTAGATTACACAAACTGCAATGCCACACACCCCACACTGTTCTCCAACAGTGGCAACTCTGTAGTCAAACTTGACCATTCAGGAACCTTCTACTTCATCAGTGGTGCATCAGGGCACTGTGAGAAGGGACAGAAGATGATTGTTAGGGTCATGGCTGATGATTCTCTTCCTCAGCATGCCAAGTCTTCTGGCTACCATGTTCCAATTGGGGTCTCTCAAATGCTTTTCTTTCAGTTTGTTTTCGCAAGTGTTGCTTCTTATGTGATTTGA 504 0.4683 MASPCSSSLLVLLFAIFTTLPRFSVASIEFQVGGSKGWVVPPANDTNHYNDWASNNRFHVGDTIWFKYKKDSVMEVRGVDYTNCNATHPTLFSNSGNSVVKLDHSGTFYFISGASGHCEKGQKMIVRVMADDSLPQHAKSSGYHVPIGVSQMLFFQFVFASVASYVI 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00526 167 CDD OsENODL1_like 29 129 IPR041846 -
Cca09g00526 167 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Cca09g00526 167 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
Cca09g00526 167 Gene3D - 27 134 IPR008972 -
Cca09g00526 167 PANTHER EARLY NODULIN-LIKE PROTEIN 21 7 132 - -
Cca09g00526 167 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Cca09g00526 167 PANTHER BLUE COPPER PROTEIN 7 132 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00526 Cca-Chr9 13285087 13286128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00526 6 129 Phytocyanin Superfamily AT3G18590 53.968 1.32e-43 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00526 - - gmx:100815728 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00526 09 13285087 13286128 Cca09g00526 09 13285087 13286128 ECH