Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00491 ATGTTATTTAGGTCTTTTGTTGGGAGGATACAAAAGGGTCTCTCATTGTTTGGACCAAGAAAGCCTGCATTCAGCTACTTCAGTGAAGATTGTGCAACATCCACTTCACCAGATGATGTTATGGAAGGATATTTTGCTGTTCTTGCGATCAAGGGTGAGGAAACCAAAAGGTTCATTGTTGGTTTGGACTACTTGAATGATCCTGCATTCTTGGAACTTTTGGACCAAGCTCGTGAAGAGTATGGTTTCATACATCAAGGAGCACTTACACTACCTTGTCGGCCTCAAGAATTATAG 297 0.4141 MLFRSFVGRIQKGLSLFGPRKPAFSYFSEDCATSTSPDDVMEGYFAVLAIKGEETKRFIVGLDYLNDPAFLELLDQAREEYGFIHQGALTLPCRPQEL 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00491 98 Pfam Auxin responsive protein 29 95 IPR003676 GO:0009733
Cca09g00491 98 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 98 IPR003676 GO:0009733
Cca09g00491 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00491 Cca-Chr9 12172037 12172333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00491 31 94 Calmodulin-binding Proteins AT3G43120 46.875 2.06e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00491 - K14488 gmx:100808634 153.295