Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00463 atgatggtgattctgaCAACCCTTTTGGTGATTTTTGTGACTGTGCTATTGAAAGTTCTCTATGACACCATTTCATGTTATTGGCTCACTCCAATGCGCATCAAAAGGGTCATGGAGAGGCAAGGTGTGTGTGGCCCCAAACCTCGGTTTCTCACAGGTAACATCATGGACATGACCTCCCTTGTTTCAAGAGCAGTTTCTCAAGACATGAAAACCATCAACCATGACATTGTTGGTCGCCTTTTGCCACATTTTGTTGCCTGGTCTAAACAATATGGAAAGAGATTCCTATATTGGAATGGTACAGAACCAAGGCTGTGCCTAACAGACACTGCATTGATAAAGGAGTTTCTGTCATCAAAGTACAGTACTATAACAGGCAAATCGTGGCAGCAACAACTAGGAAGCAAACATTTCATTGGCCGAGGATTGTTGATGGCAAATGGTGAAGAATGGTACCACCAACGACACATGGTTGCCCCTGCATTCATGGGAGACACACTTAAGAGCTATGCATGGCACATGGTGGAATGCACAAAGGAAATGATTGAATCACTGGAAAATGTGTTGGAGAGTGGGCAAAGTGAGGTAGAGATAGGAGAATGTTTCACCAAACTCACTGCAGATATCATCTCAAGAACTGAGTTTGGTTCAAGTTATCAAAAGGGAAAGCAAATATTCCATCTTCTCACACAGTTGCAGAGTCGTTGTGCTCAAGCAACTCGTCACCTTTGCTTTCCTGGAAGCAGGTTTTTGCCAAACAAGTACAACAGAGAGATAAAGTCCATGAAGAAGGAGGTGGAGAGACTCTTGATGGAGATCATAGAGAGTAGAAAGGATTGTGTGGAGATGGGGAGAAGCAATACTTATGGGAATGATTTGTTGGGAATACTATTGGATGAGATAAAAAAGGAGGGTGGTGGCTTGAATCTACAACTTGTTATGGATGAATGCAAAACATTTTTCTTTGCTGGACATGAAACCACAGCACTCTTACTCACTTGGGCATTCATGTTGCTAGCTAGCAATCCTCATTGGCAAGAAAAAGTCAGAGCTGAGGTCAAAGAGGTCTTCAAGGGAGCAACTCCATCGGTTGATCAACTCTCCAAACTCACTCTGACACATATGGTAATCAACGAGTCAATGAGGCTGTACCCTCCGGCAACAGTGCTTCCAAGAACGGCATTCAAAGACATTCAACTGGGTGATCTTCACATTCCCAAAGGCTTATCAATTTGGATTCCAGTGCTAGCCATTCACCACAGTGAAGAGCTTTGGGGCAAAGATGCAAACAAGTTCAACCCTGAGAGGTTTGCTTCAAAGTCCTTCATGCCTGGCCGTTTCATTCCATTTGCCTCTGGCCCTAGAAACTGTGTTGGACAATCATTTGCCATCATGGAAGCTAAGATCATTCTGGCCATGTTGCTGTCTAGGTTTAGCTTCACCATTTCTCAGAATTATAGGCATGCACCAGTGGTTATCCTCACCATTAAGCCCAAGTATGGTGTTCAACTTTGCCTCAACCCTTTAGAGCCATAA 1539 0.4327 MMVILTTLLVIFVTVLLKVLYDTISCYWLTPMRIKRVMERQGVCGPKPRFLTGNIMDMTSLVSRAVSQDMKTINHDIVGRLLPHFVAWSKQYGKRFLYWNGTEPRLCLTDTALIKEFLSSKYSTITGKSWQQQLGSKHFIGRGLLMANGEEWYHQRHMVAPAFMGDTLKSYAWHMVECTKEMIESLENVLESGQSEVEIGECFTKLTADIISRTEFGSSYQKGKQIFHLLTQLQSRCAQATRHLCFPGSRFLPNKYNREIKSMKKEVERLLMEIIESRKDCVEMGRSNTYGNDLLGILLDEIKKEGGGLNLQLVMDECKTFFFAGHETTALLLTWAFMLLASNPHWQEKVRAEVKEVFKGATPSVDQLSKLTLTHMVINESMRLYPPATVLPRTAFKDIQLGDLHIPKGLSIWIPVLAIHHSEELWGKDANKFNPERFASKSFMPGRFIPFASGPRNCVGQSFAIMEAKIILAMLLSRFSFTISQNYRHAPVVILTIKPKYGVQLCLNPLEP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00463 512 Coils Coil 260 280 - -
Cca09g00463 512 Coils Coil 176 196 - -
Cca09g00463 512 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 SUPERFAMILY Cytochrome P450 76 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 Pfam Cytochrome P450 85 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 506 - -
Cca09g00463 512 Gene3D Cytochrome P450 27 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00463 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00463 Cca-Chr9 11405113 11411062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00463 1 372 Cytochrome P450 AT5G38450 68.966 3.25e-178 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00463 K10717 - gmx:100812567 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00463 09 11405113 11411062 Cca09g00463 09 11405113 11411062 ECH