Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00436 ATGGCAACTCCGCCGGTGGTGAGGTTTCCGATCTTCACGGCGGTGAGAGCGGTGGGCGTGATCATCGCAGTTCTTGTCCTGACGTGGGCCCTCCATTTCAGGGGAGGCCTTGCTCTCGTTTCTGATAACAAAGATCTCATTTTTAATGTTCATCCGGTGTTGATGGTGATTGGGCTTGTTCTAATCAATGGTGAAGCGATGCTTGCATACAAGACCTTATCTGGAACTAAAAGCCTCAAAAAATCAGTTCATCTCGCATTACAGTTTATCGCACTCATTTTGAGCTTAATTGGTATCTGGGCTGCTTGGAAGTTTCACATTGACAAGGGCATTGACAACTTCTACAGCCTGCATTCATGGTTAGGCCTTGCATGCATTTTCCTATTCACCATCCAGTGGGGTGCTGGGTTTGCAACATTTTGGTACCCTGGAGGGTCAAGAAATAGTAGAGCAGCCTTATTGCCATGGCACGTGTTCTTTGGGATCTATATCTATGCCTTGACTATAGCCACAGCTACTACTGGTATTTTGGAAAAAGTTACATTCCTTCAGGTCAACAAGATCATATCACGCTATTCCAATGAGGCACTTCTGGTCAATTCCTTAGGCATTTTGATTGTCATTTTGGGTGGCTTTGTGATTCTTGGAATTGTTACTCCAGTTTATGGTAAAGCTGATATCATAAGAGGAAATGAATGA 699 0.4421 MATPPVVRFPIFTAVRAVGVIIAVLVLTWALHFRGGLALVSDNKDLIFNVHPVLMVIGLVLINGEAMLAYKTLSGTKSLKKSVHLALQFIALILSLIGIWAAWKFHIDKGIDNFYSLHSWLGLACIFLFTIQWGAGFATFWYPGGSRNSRAALLPWHVFFGIYIYALTIATATTGILEKVTFLQVNKIISRYSNEALLVNSLGILIVILGGFVILGIVTPVYGKADIIRGNE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00436 232 Pfam Eukaryotic cytochrome b561 50 182 IPR006593 -
Cca09g00436 232 PANTHER CYTOCHROME B561-RELATED 5 231 IPR043205 GO:0016491
Cca09g00436 232 Gene3D - 1 230 - -
Cca09g00436 232 ProSiteProfiles Cytochrome b561 domain profile. 14 218 IPR006593 -
Cca09g00436 232 PANTHER B561, PUTATIVE-RELATED 5 231 - -
Cca09g00436 232 SMART 561_7 50 176 IPR006593 -
Cca09g00436 232 CDD Cyt_b561_ACYB-1_like 41 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00436 Cca-Chr9 10552950 10556163 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00436 1 228 Chloroplast and Mitochondria Gene Families AT5G38630 74.123 3.88e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00436 K08360 - gmx:100787570 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00436 09 10552950 10556163 Cca09g00436 09 10552950 10556163 ECH