Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g00434 | ATGCACGCCAAAGGTTCTAATATCGGAAAAACCTGCATAGAGTTACCAGGAAATTCTGCATCATTTGGTCCAAATCTTCCTCTGCAGGCAGGTTTTGATTTAAGCAATCAATATAATGCAAGGAATCAAGTAGGGATCTTTCCAGACTGGCGTAAGAATACTGCAATCAGTCACGGCCGAAATTTGATTAGAAATAAAATTTCTGCATTTTTCAGGTGCCGACTCCAATATGACAAAGAACGGGCTTCAGTTATAACAAATATTCTGGAAAACGAGTTATTTATTAATGCTTCTTCACAGGAGGAGTACATGAACCAGAATACGTTGATACATCGATTGAATACTGTACTGAAAAAGTTGACAGGAACAAAGTGCAGCCAAAATGCTGATAGTTCTATTACTTGTACATCTAAGACAGTGCCCTCTTCAGATTTATCACAACCTGCTTTTCAGAAAGTGTTCAACAATCAATCATCTGATAAGTGTTCATCAATCACTACATGCACCGATGTGGATGTGCTTTCTAACTTTTCTGTTTCTGCTGCGAATATTAATCTGGAAACTAGGTCCAAATCAATTGATAGTCATTTTCCTCAGCAACATCCAAACAATTGGGAGGTTGATCCAATGAAGCATGTAGATTGTTCAATGGCTATGATTACTACAAAGGGAAAGTCCCTCCAATCTGAATGTTCAAATTCTCTGAGCCTTCCACATGTCTCAAGAGAATTTTCAAGAGTTTCCAATCTTTTTCCTGGCTCAAGCAGCTTTGGAGATATAAGGCAACATCAACACCAGAAGCCAGATTTTCAACAGAATCTCAAACATTTTAGGCAGTCACATGTTCTTCATGATAAAACTTCTATTGTTCAGCCTAATTCTTGCTTTGTCAGTCAAGGTGAACATCTCCGTCAAATATTGGGTCAGAAAACATTGAAACAGCCGGAGCATTTAAGTCCCGATGCGGATAAACAGTTCACTTCAGGAAGCTCAGCAGCAAATCTTTTTGGTTTAGATGGATCTGCTAATATGAATATCGATAGTAATTTTGAACTAACAGATATACAAAGGATCGTGCTTCAATATCTTTTCTACAAAAAAGCAAGCGATTTTTCACTGGATCTTGCTATGAAACATCTGCATTCAAAAGCTTGTGGTGAAGGGATATGTAATTGTGGAAAGTATAGCATGCTGTTATTGCATTTTGATGCCTGTCAAGATGGTAATTGTCAAACATGTTCCTCCTGGAAATTGCTAGGCACTTATACTCGTGAGCGTTATTTGAAATCGAATAGCCTTAATAAGAGTTCTGTTGTAAGAAAAAATAATGCCTCTTACGATAGTTCTGAACACATGGTATCACCTGCTGTCAAAAGAAGAAAAATGAAATCTGCCTTTGGTGATCCTTTAATTAATAATGCAAGTTTGGATTGGTGGACTCACAAAATGGTTCAATTGCAGCAACAGCCAGAATCTTCGCTCCCACCTATCTATTCTAAAGTTTCAGGGTGCAATTCCGAACAACTTACAAATCCAATGCTTGATTCAATAATCAATAATGAGATAAAGAGCAATCAGGAAACAGTCCGCAACAGCGATCATGTGAAAGACATCAGCAACTCAGAAGAAGCTGTTATTAGATCGAATTCCAACATTCATACTCTCTACAACGAACTTATGTCTGCTGATATAAACAACGTCAGAATCTCAGAGGAAACTATCGTTGGATCTAATTCCAATGTGCATATTCTCTGCACAGAACCTATGCCAGCAGATGTAGAGAGCATACAAGGTGGAACTGGGTTGACTCAGGATGGGATAAATGATACAAAGAAAGCCATGGAGTCAAAAGCTGATCAAGAGAAGGAAACGGAATCCTCAAATGCAACGGTTAATACTGTTTCCTTAACTGATTTTTTCACATGTAATCAAATAACTGAACACATTGCAAGTCTGAGAAAGCAATTTAATCAGAGTACAACGGTTGAAGAACCGGCAGTTGATGGTTTTGAATGCCAGTTATGTGAAATGGGAACTCTTCATTTTGCCCCCCTGCCAATTTATTGCTTTTGTTGCGGCATCCGTATAAAGCGAAACTCATACTATTACTATAGAAGAGAAGAAGATGATACACAACCTTGCTTTTGCACTGTGTGTTATAGGAATTCTCGAGGGGGTAACATCACATTCAATGGGACATCTGTTTCCAAGACAGATCTTGATAAAAAGACAAACAATGGAGAATTTGAAGAAGCATGGGTTGAATGCAGTAAATGCAAAAGTTGGCAGCATCAAATATGTGCACTCTATAACGATAAAAGAGATTTGGACAACAGTGCTGAGTATACGTGTCCTATATGTCGCTTAAAGGAAATTGAAAATGGAATGCATGTACCCTTACCAAAGAATGCTATGTTTGGTGCTAAGGACTTGCCAAGCACCATGCTAAGTGACCATATAGAGAGGCGACTTTTTAAGCGTCTCATGCAAGAGAGTGAAGATTGGGCAAAAGTCGAAGGGAATAAGAATCTTGATGAAGTTTTATTAGCAGAAAATCTTTCTGTTAGAGTAGTGTTATCTGTCGAGAAACAATTGAAAGTGAAGAAACAGTTTCTAGAGATATTTGCGGAGGAGAATTACCCAGCCGAGTTTCCTTATACATCAAAAGTTATTCTTCTGTTTCAGCAGATTGAAGGTGTAGATGTATGCCTTTTCGCAATGTATGTCCAGGAGTTTGGATCCGAATGTGGCAATCCAAATAAGCGTAGTGTGTATATTTCATATCTTGATTCTGTCAAGTATTTTCGGCCCCAAAGAGCGACCATGAATGGAGAAGCTCTTCGTACCTTCGTTTACCATGAGATATTGATTGGATATCTAGACTTTTGCAAGAAACGTGGTTTCACAACTTGCTATATATGGGCCTGTCCACCTATAAAGGGGGAAGATTACATACTATATTGTCATCCTGACACTCAAAAAACACCGAAGAATGATAAACTTCGACACTGGTATCTTTCAATGCTAAGAAAGGCTGCCCAAGAAAATATCGTTGTTGGTTTAACCAACATATACGATAATTTCTTTGTTTCTAGTGGAAACTGGGACTCCAAGGTAACAGCTGCTCGTTTGCCTTACTTTGATGGAGACTTCTGGTCTGGTACTGCTATGGACAAAGTCAGGATCATTGAGCAAGAGAGTGGAGGAGACTATGAAAAGATGTTGAAACTAGTACCAAAAAGAACTTTAAAGGCTATGGGACATGTAGATCCTTCAAAAGGAACCGCCAAAGACATTCTAGTGATGCAAAAACTGGGACAAGCCATACTACCATTCAAGGAAGATTTTATCATAGTTCAATTACGGTATGTTTGCACGCACTGCAATGAAGTGATAGTGTCTGGAAAGCGATGGTTTTGCACTGCCATTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTTCTGATTCACACGCCTCTGTCAATGGCGATAAGCATAGACTTTGTCAGGACCTCATGGATGATGATATCCTTTGTGATACTAAGGAGAATGATGTGACCCTTGATAATGAGTTCTTTGATACTAGGCATAACTTTTTGAGCTTTTGCCAAAAGAATAGCTTTCAGTTTGACTCGCTGCGCCGAGCCAAGTATTCCTCAATGATGATCCTCTATTTTCTAAAGAATCCTTCTTTGCTGAATGTTGGAACAATATGTCGTGTTTGCAATAAACAAAACGTTTACCAGTACCACTGGAAATGTCAGAGTTGCCCAGAGTTCATTGTCTGCGCTGCATGCTATGAAAAGAGAGGTGCTAATTGCCATGCACACACGTTGATTCAAACTTATTCAACAGTTCTAAGTCCTTCAGGGAATCAAGAGTTAAATCCGAAAGCGGCACTGATACAGGAACTGCAAGATGTTGTAAAGCATGCATCGCAGTGTCGCTCAACCAAAACTCAACCATGCACATATCTACACTGTCTTCAAATTAAAAAACTGTTCTCTCATGCAAGTAGGTGCACCATCCGAATTTCTGGCGGATGTAGATACTGCAAGAAGGTTTGGGTGGCACTAGCTGTACACTCAAGGAGTTGTAGGGACTCAGGATGTTGCATCCCTCGTTGCAGGGATCTGAAGAAGCAAGCAGAATGGATAGCAACGCAATCTGAATCGCGACGTAGAGCTGCAGTTTTGGAAGGCAACAGCGAACTACTCTCTCCTCGTTGA | 4236 | 0.3945 | MHAKGSNIGKTCIELPGNSASFGPNLPLQAGFDLSNQYNARNQVGIFPDWRKNTAISHGRNLIRNKISAFFRCRLQYDKERASVITNILENELFINASSQEEYMNQNTLIHRLNTVLKKLTGTKCSQNADSSITCTSKTVPSSDLSQPAFQKVFNNQSSDKCSSITTCTDVDVLSNFSVSAANINLETRSKSIDSHFPQQHPNNWEVDPMKHVDCSMAMITTKGKSLQSECSNSLSLPHVSREFSRVSNLFPGSSSFGDIRQHQHQKPDFQQNLKHFRQSHVLHDKTSIVQPNSCFVSQGEHLRQILGQKTLKQPEHLSPDADKQFTSGSSAANLFGLDGSANMNIDSNFELTDIQRIVLQYLFYKKASDFSLDLAMKHLHSKACGEGICNCGKYSMLLLHFDACQDGNCQTCSSWKLLGTYTRERYLKSNSLNKSSVVRKNNASYDSSEHMVSPAVKRRKMKSAFGDPLINNASLDWWTHKMVQLQQQPESSLPPIYSKVSGCNSEQLTNPMLDSIINNEIKSNQETVRNSDHVKDISNSEEAVIRSNSNIHTLYNELMSADINNVRISEETIVGSNSNVHILCTEPMPADVESIQGGTGLTQDGINDTKKAMESKADQEKETESSNATVNTVSLTDFFTCNQITEHIASLRKQFNQSTTVEEPAVDGFECQLCEMGTLHFAPLPIYCFCCGIRIKRNSYYYYRREEDDTQPCFCTVCYRNSRGGNITFNGTSVSKTDLDKKTNNGEFEEAWVECSKCKSWQHQICALYNDKRDLDNSAEYTCPICRLKEIENGMHVPLPKNAMFGAKDLPSTMLSDHIERRLFKRLMQESEDWAKVEGNKNLDEVLLAENLSVRVVLSVEKQLKVKKQFLEIFAEENYPAEFPYTSKVILLFQQIEGVDVCLFAMYVQEFGSECGNPNKRSVYISYLDSVKYFRPQRATMNGEALRTFVYHEILIGYLDFCKKRGFTTCYIWACPPIKGEDYILYCHPDTQKTPKNDKLRHWYLSMLRKAAQENIVVGLTNIYDNFFVSSGNWDSKVTAARLPYFDGDFWSGTAMDKVRIIEQESGGDYEKMLKLVPKRTLKAMGHVDPSKGTAKDILVMQKLGQAILPFKEDFIIVQLRYVCTHCNEVIVSGKRWFCTAIECKKFQECERCHTSDSHASVNGDKHRLCQDLMDDDILCDTKENDVTLDNEFFDTRHNFLSFCQKNSFQFDSLRRAKYSSMMILYFLKNPSLLNVGTICRVCNKQNVYQYHWKCQSCPEFIVCAACYEKRGANCHAHTLIQTYSTVLSPSGNQELNPKAALIQELQDVVKHASQCRSTKTQPCTYLHCLQIKKLFSHASRCTIRISGGCRYCKKVWVALAVHSRSCRDSGCCIPRCRDLKKQAEWIATQSESRRRAAVLEGNSELLSPR | 1411 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g00434 | 1411 | SUPERFAMILY | RING/U-box | 1100 | 1164 | - | - | |
Cca09g00434 | 1411 | SUPERFAMILY | TAZ domain | 1304 | 1383 | IPR035898 | - | |
Cca09g00434 | 1411 | Gene3D | - | 1234 | 1284 | IPR043145 | - | |
Cca09g00434 | 1411 | SUPERFAMILY | RING/U-box | 1217 | 1285 | - | - | |
Cca09g00434 | 1411 | Pfam | TAZ zinc finger | 1305 | 1378 | IPR000197 | - | |
Cca09g00434 | 1411 | SMART | KAT11_2 | 839 | 1132 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Cca09g00434 | 1411 | Gene3D | TAZ domain | 1294 | 1410 | IPR035898 | - | |
Cca09g00434 | 1411 | ProSitePatterns | Zinc finger ZZ-type signature. | 1241 | 1268 | IPR000433 | GO:0008270 | |
Cca09g00434 | 1411 | Pfam | Histone acetylation protein | 844 | 1053 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Cca09g00434 | 1411 | PANTHER | HISTONE ACETYLTRANSFERASE HAC2 | 524 | 1383 | - | - | |
Cca09g00434 | 1411 | SMART | TAZ_2 | 1298 | 1379 | IPR000197 | - | |
Cca09g00434 | 1411 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 748 | 791 | IPR013083 | - | |
Cca09g00434 | 1411 | CDD | PHD_HAC_like | 715 | 787 | - | - | |
Cca09g00434 | 1411 | SMART | PHD_3 | 715 | 788 | IPR001965 | - | |
Cca09g00434 | 1411 | PANTHER | CBP/P300-RELATED | 524 | 1383 | IPR013178 | GO:0004402|GO:0006355|GO:0016573 | |
Cca09g00434 | 1411 | ProSiteProfiles | Zinc finger PHD-type profile. | 713 | 790 | IPR019787 | - | |
Cca09g00434 | 1411 | SUPERFAMILY | FYVE/PHD zinc finger | 748 | 790 | IPR011011 | - | |
Cca09g00434 | 1411 | ProSiteProfiles | CBP/p300-type histone acetyltransferase (HAT) domain profile. | 805 | 1234 | IPR031162 | GO:0004402 | |
Cca09g00434 | 1411 | ProSiteProfiles | Zinc finger TAZ-type profile. | 1297 | 1381 | IPR000197 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g00434 | Cca-Chr9 | 10527853 | 10539446 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TAZ | Cca09g00434 | HAT_KAT11 | 7.6e-30 | CL0257 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g00434 | K04498 | - | gmx:102664049 | 1674.45 |