Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00381 ATGGCTCATCAAAAGGTAAAAATCATAGAGCAATGCAATGTTTCTCCCCCACCAAGCACCGTTCCCTCAACTTCTCTTCCTCTAACCTTCTTTGACATTCCTTGGGTTACCTGTGGCCCAGTGCAAAGCATTTTCTTCTATGACTTTCCCTTCTCTTGTCACCACTTCTTGCAAACGGTGCTTCCCACTCTCAAATACTCTCTTTCCCTAACCCTAAAACACTTTTTCCCTTTTGCTGGAAATCTTGTGTTTCCTACTCGACCCCACTTCCCTCACATCCTCTACTCGGAAGGTGACTCACTCTCCTTCACCATTGCTGAGTCCAATGCAGTGTTTCCATGCCTCATAGGTGACACTGCAAGAGATGTTAGAGACTTGCACCCTTGTGTTCCTGTGTTGCCTACCCCTAGTGACAAAGAAGATGGCACATGGTTCTTCCCTCTTATGGCTATTCAACTCACCATTTTTCCCAACCAAGGGTTCAGCATTTGCATGAGTTTAAGACACGTTGTGGATGGAAGAGCATTTCATCATTTCATGAAATCGTGGGCTTATATTTGTAGGAGCACAACATGTGGTGGTGGTGACTTGGCATCGTCCCTTGAAGGCTCTCATGCTTTGCCGTTTCACAATAGGGACATCATTGAAGATCCCAAAGGGCTTAAAATCACACTTTTGGAGGAGTTATGGAATTTGCCTCGAGAAAACATGAAAAAACTCATAGATCGATCCATCACTAATGTTGTCATTAATAACAATGAAAAAGTTCGTGCTGTGTTCATCTTGAACCGTGACCATATAGAGAAACTAAAGAAATGGGTGTATAGTGAGTGCAAGAGAAATGGGTTTGACTTTGAGTCATTGCACGTATCAACCTTTGTGGTGACAAGTGCTTTGATGTGGGTTTGTAAGGTTCAATCAGAAGTGACCAATCCTATACCTAATAATGATGAAATATACAAATTGGCATTTCTAGCCGATTGTCGTAACCGTCTTGAGTTTTCAATCCCTTCTACTTATTTTGGAAATTGTGTTGTTGGTCACATGGCATCACTCAAGAGGAGCAAGTTGGTGGGAGGAAATGGGATTGTTGAGGCAGCTATTGCTATTGGAAGGGAAGTTAGGGAATTTCAGTTTGATGCTTTGAAAGGGGTTGAAAGGTGTATGGTTGATGCTAAAGAAATAGGACAATTGGGACAACATGTGGCAATTACAGGGTCACCAAAGCTGGGCGCATATGCCATTGATTTTGGATTGGGAAAGCCTAAAAAGTGTGAAATACTTCATATAGAACACTCAGGATCTATTTCTCTTTCAGATTGCAGGGATGATGAAGGTGGAGTGGAAGTTGGACTAGTACTTGGAAGGGTTCAAATGGCTGATTTTTCTACTATCTTGAAAGATTATCTTGAAAATGTTGCTAGTAGTGACTAG 1434 0.4205 MAHQKVKIIEQCNVSPPPSTVPSTSLPLTFFDIPWVTCGPVQSIFFYDFPFSCHHFLQTVLPTLKYSLSLTLKHFFPFAGNLVFPTRPHFPHILYSEGDSLSFTIAESNAVFPCLIGDTARDVRDLHPCVPVLPTPSDKEDGTWFFPLMAIQLTIFPNQGFSICMSLRHVVDGRAFHHFMKSWAYICRSTTCGGGDLASSLEGSHALPFHNRDIIEDPKGLKITLLEELWNLPRENMKKLIDRSITNVVINNNEKVRAVFILNRDHIEKLKKWVYSECKRNGFDFESLHVSTFVVTSALMWVCKVQSEVTNPIPNNDEIYKLAFLADCRNRLEFSIPSTYFGNCVVGHMASLKRSKLVGGNGIVEAAIAIGREVREFQFDALKGVERCMVDAKEIGQLGQHVAITGSPKLGAYAIDFGLGKPKKCEILHIEHSGSISLSDCRDDEGGVEVGLVLGRVQMADFSTILKDYLENVASSD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00381 477 Gene3D - 252 472 IPR023213 -
Cca09g00381 477 Gene3D - 5 241 IPR023213 -
Cca09g00381 477 PANTHER - 4 474 - -
Cca09g00381 477 Pfam Transferase family 5 463 - -
Cca09g00381 477 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 4 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00381 Cca-Chr9 9076303 9077986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00381 43 466 Monolignol Biosynthesis Gene Families AT5G48930 25.000 1.66e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00381 - - gmx:100797080 582.022