Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00377 ATGGGGCTTGCAAGTGCAAGCAATTACTCCACCATGGCTATGGCACCAATTGGTGCAAGTTTGAAAAATGCTACCTCTCCCATTCCCTATCTCTTTGGTGGCTTAGCTCTCATGCTCGCACTCATAGGATTGGCATTGCTTATTCTAGCTTGCTCTTATGGTAAAAGTTCTTCATCAACTTCACAAGCGACAAATGCAATGGGAATGGAGGTTGATTCAGAGCCCAAGATTGTTGTTATAATGGCTGGAGATAGCAACCCCACATACATGGCCAAGCCCATGCCATCCACAAACCATAGTACTGGAGAAGCAGATTAG 318 0.4528 MGLASASNYSTMAMAPIGASLKNATSPIPYLFGGLALMLALIGLALLILACSYGKSSSSTSQATNAMGMEVDSEPKIVVIMAGDSNPTYMAKPMPSTNHSTGEAD 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00377 105 PANTHER PROTEIN, PUTATIVE-RELATED 5 104 - -
Cca09g00377 105 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 5 104 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00377 Cca-Chr9 8922102 8922728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00377 26 93 Glutamine Dumper (GDU) Family AT2G24762 48.101 3.97e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00377 - - gmx:102659552 122.864