Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00375 ATGGGGCCAATAAGTAGTTCATCATCATCAGCCAATGGGATTAGGAGCTGGAATTCTCCAATTCCTTACCTCTTTGGAGGCTTATCTCTGGTGATGATTCTGATTTCTGTGGCACTCATGATCCTTATTTGCTCCCAAAGAAAACATGTTTTTGAGTCTTCAGCTGAAGGTGAAGAAACCGAAGAAGCAATACCCCAGAACATAGAGGTTGAGTATGAGCCTAGGATACTTGTGATCATGGCAGGGGATGACAAACCCACATACCTTGGGAAACCAATCACTTCTTCAACTCACTGTACATGTGCAGTGAACAGTGTTAAGTGTTAA 327 0.4281 MGPISSSSSSANGIRSWNSPIPYLFGGLSLVMILISVALMILICSQRKHVFESSAEGEETEEAIPQNIEVEYEPRILVIMAGDDKPTYLGKPITSSTHCTCAVNSVKC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00375 108 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 6 105 IPR040359 GO:0080143
Cca09g00375 108 PANTHER PROTEIN, PUTATIVE-RELATED 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00375 Cca-Chr9 8892893 8893438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00375 4 102 Glutamine Dumper (GDU) Family AT4G25760 42.857 4.18e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00375 - - aprc:113867685 135.191