Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00371 ATGCAAACCAGGGAAGTCTCAGGCCTCAATTACTTACTCCCTTCAAACCCTTGTCCCTACCCTCCCAACAACTACACCATGATCCAAAACAACAACATTCCCACATTCCAATTTCCAAGATTCTCCAACCAATTATTATATGGCTacaacaacaacaaccacaaccaaaaccaaaaccCTATCCATGACTTTAGTCCTCAATCATCATGCATCAGCAGCAACTCCACCTCTGATGAGGCTGATGAGCAGCAACTGAGTCTCATCAATGAAAGAAAGCACAGGAGGATGATATCAAACCGTGAATCCGCACGTAGGTCACGCATGAGGAAGCAGAAGCACCTCGATGAGCTTTGGTCGCAAGTGGTGTGGCTCAGGAATGAGAACCACCAACTCATAGACAAGCTGAACCATGTTTCAGAAAGCCATGACCAAGTGGTTCAAGAGAATGCTCAGCTCAAAGAACAAGCCTCGGAACTTCGACAAATGATAAGGGACATGCAGATACACAGTCCTTGCCCCTCCTTCACCCCTTTGGAAGATGATGCTTACCTCAGATCTGCAGATTCTTCAAATCATTCCAACTCAAGTAACATGGACCTTCTTGGATGA 609 0.4335 MQTREVSGLNYLLPSNPCPYPPNNYTMIQNNNIPTFQFPRFSNQLLYGYNNNNHNQNQNPIHDFSPQSSCISSNSTSDEADEQQLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDQVVQENAQLKEQASELRQMIRDMQIHSPCPSFTPLEDDAYLRSADSSNHSNSSNMDLLG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00371 202 Gene3D - 89 144 - -
Cca09g00371 202 SUPERFAMILY Leucine zipper domain 91 141 IPR046347 GO:0003700|GO:0006355
Cca09g00371 202 SMART brlzneu 87 151 IPR004827 GO:0003700|GO:0006355
Cca09g00371 202 MobiDBLite consensus disorder prediction 50 81 - -
Cca09g00371 202 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 202 IPR044521 -
Cca09g00371 202 Coils Coil 135 169 - -
Cca09g00371 202 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 94 109 IPR004827 GO:0003700|GO:0006355
Cca09g00371 202 Pfam bZIP transcription factor 91 143 IPR004827 GO:0003700|GO:0006355
Cca09g00371 202 CDD bZIP_plant_GBF1 92 143 IPR045314 GO:0003700|GO:0006355
Cca09g00371 202 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 89 152 IPR004827 GO:0003700|GO:0006355
Cca09g00371 202 PANTHER BZIP TRANSCRIPTION FACTOR 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00371 Cca-Chr9 8830218 8831390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00371 45 175 bZIP Transcription Factor Family AT3G30530 67.164 1.46e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca09g00371 bZIP_1 1.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00371 - - aprc:113867865 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00371 09 8830218 8831390 Cca09g00371 09 8830218 8831390 ECH
Cca09g00371 09 8830218 8831390 Cca07g02317 07 51710801 51711842 PCT