Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00363 ATGAGGAGTGGAAGTGTTGCACCCAAGGAAGAGGAGCAAAAATCAAGAAGGAACAAGAGAGTTGTTGATGAGAATGCTCCTTTGATATCCAAGGTTCAAGATAGTGATGATGGTGCAAGGTTTGATGAGTTTCTTGGGGCTGTTTTCAACTTGTCCACCACAATTATTGGTTCTGGGATCATGGGGTTGCCAGCATGTGTGAAAAAGTTAGGGATGGTGCCTGGTCTTATTGTTATCATCTTGATAGCTTTCATGACAGAGAAGTCAATTGAGTTCATGATTAGGGTTTCCAAGGCAGGGAATTTTTCTTCTTATGGCTCTCTCATGGGTGATGCTTTTGGGGAATATGGGAAAGCTTTGGTGCATATATGTATTGTAGCCAATAACATTGGTGGATTGATTATTTACATGATTATTATTGGTGATGTAATTTCTAGAACAACTTCAAGTGGAACTCACCATTCTGGAGTTCTTGAAGGATGGTTTGGGGTCCACTGGTGGACTAGGCAAACATTTGTTCTTTTGTTTTCAACACTTGTTGTGTTTGCACCTTTGGTTAGCTTTAAGCAAATTGATTCATTGAAATTCACATATGCATTATCAGTTGGACTAGCAATTATTTTTGTTGTCATTTTTGTGGGAATCTCAATCTTCAAGATTATAATTGGAGGCATTGAGATGCCCAGACTCTTCCCGATCATTACAGATATAACATCATTTTTTGAACTATTCACTGTAGTTCATGTGCTTGTCACTGCCTATATTTGCCACTACAATATTCATAGCATAGACAATGAACTTGAGGACTCCTCTCAGATGCATAGCGTTGTGCGTACTTCTCTTGGTCTATGTGCTTCAGTGTACTTGCTGACAAGCTTTTTTGGGATCCTCCTATTTGGTGAAGGAACTCTTGATGATGTTCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTTCTCAATGATGTTGTTAGATTTAGCTATGCTTCACATATTGGGCTTGTATTTCCAGTGATCTTCTATTCAGTGCGTGTCAACCTAGATGGTCTCATATTTTCATCGTCTAGGCCTTTGGCTCAAGATAACATCAGATTTGCATTAATAACTGTCTCACTTATTGGTGTTATCTTTTTGGGAGCAAATTTCATACCCAACATTTGGGATATCTTCCAGTTTATTGGAGCAACAACAGCTGTTTGCGTAGGATTCATATTTCCAGCTGCCATTGCTCTTCAGTGA 1248 0.3894 MRSGSVAPKEEEQKSRRNKRVVDENAPLISKVQDSDDGARFDEFLGAVFNLSTTIIGSGIMGLPACVKKLGMVPGLIVIILIAFMTEKSIEFMIRVSKAGNFSSYGSLMGDAFGEYGKALVHICIVANNIGGLIIYMIIIGDVISRTTSSGTHHSGVLEGWFGVHWWTRQTFVLLFSTLVVFAPLVSFKQIDSLKFTYALSVGLAIIFVVIFVGISIFKIIIGGIEMPRLFPIITDITSFFELFTVVHVLVTAYICHYNIHSIDNELEDSSQMHSVVRTSLGLCASVYLLTSFFGILLFGEGTLDDVLANFDTDLGIPFGSVLNDVVRFSYASHIGLVFPVIFYSVRVNLDGLIFSSSRPLAQDNIRFALITVSLIGVIFLGANFIPNIWDIFQFIGATTAVCVGFIFPAAIALQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00363 415 PANTHER AMINO ACID TRANSPORTER 7 414 - -
Cca09g00363 415 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g00363 415 Pfam Transmembrane amino acid transporter protein 45 412 IPR013057 -
Cca09g00363 415 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00363 Cca-Chr9 8653056 8673322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00363 12 415 Amino Acid or Auxin Permease AAAP Family AT5G38820 59.658 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00363 K14207 - gmx:100791286 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00363 09 8653056 8673322 Cca09g00363 09 8653056 8673322 ECH