Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00362 ATGAGGAGTGGAAATCTTGCACCTAAGGAAGAGGAGCAAAAATCAAGAAGGAACAAGAGAGTTGTTGATGAGAATGCCCCTTTGATACCCAAGTTTCAGGAGAGTGATGGTGCAGGATTTGATGAGTTTAATGGGGCTTCATTTTCTGGGGCTGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCAGCATGTGTGAAGAAGTTGGGGATGGTGCCTGGTCTTCTTGCTATCATCTTAGCAGCTTTCATGACAGAGAAGTCAATTGAGTTCATGATTAGGATTTCCAGAGCAGGGAATCTTTCTTCTTATGGGACTCTCATGGGGGATGCTTTTGGGAAATATGGGAAAGCTTTGGTGCAGATATGTATTGTAGTCAATAACATTGGTGTGTTGATTATTTACATGATTATTATTGGTGATGTAATTTCTGGAACAACTTCAAGTGGAACTCACCATTCTGGTGTTCTTGAAGGATGGTTTGGAGTCCACTGGTGGACTGGGCGAATGTTTGTTCTTTTGTTTTCAACTCTTGTTGTCTTTGCACCTTTGGTCAGCTTTAAGCGAATTGATTCATTGAAATTCACATCTGCATTATCAGTTGGACTAGCAGTTGTTTTTCTTGTGATTGCAGTGGGAATATCAATCTTCAAGATTATAATTGGAGGCATTGAGAAGCCCAGACTCTTCCCGATCGTTACAGATGTAACATCATTTTTTGAACTGTTCACTGTAGTTCCTGTGCTTGTGACTGCCTATATCAGCCACTCCAATGTTCACAACATAGACAATGAACTTGAGGACTCTTCACAAATGCATGGCGTTGTTCGTACTTCCCTCGTTCTATGTGCTTCAGTGTACTTACTGACAAGCTTCTTTGGCTTCCTCCTATTCGGTGAAGGGACTCTTGATGATGTTCTTGCCAACTTTGACACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTAGATTTAGCTATGCAGCACATCTTTTGTTTGTGTTTCCAGTTGTCTTCTATGCAGAGCAAATTTCATACCCAGCATTTGGGACATTTTCCAGTTTACTGGAGCAACAGCAGCTGCTTGTGTAG 1116 0.4167 MRSGNLAPKEEEQKSRRNKRVVDENAPLIPKFQESDGAGFDEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLAIILAAFMTEKSIEFMIRISRAGNLSSYGTLMGDAFGKYGKALVQICIVVNNIGVLIIYMIIIGDVISGTTSSGTHHSGVLEGWFGVHWWTGRMFVLLFSTLVVFAPLVSFKRIDSLKFTSALSVGLAVVFLVIAVGISIFKIIIGGIEKPRLFPIVTDVTSFFELFTVVPVLVTAYISHSNVHNIDNELEDSSQMHGVVRTSLVLCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLLFVFPVVFYAEQISYPAFGTFSSLLEQQQLLV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00362 371 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 354 - -
Cca09g00362 371 PANTHER AMINO ACID TRANSPORTER 7 354 - -
Cca09g00362 371 MobiDBLite consensus disorder prediction 1 20 - -
Cca09g00362 371 Pfam Transmembrane amino acid transporter protein 46 349 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00362 Cca-Chr9 8604930 8610710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00362 4 353 Amino Acid or Auxin Permease AAAP Family AT3G30390 64.571 2.01e-158 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00362 K14207 - gmx:100791286 585.874