Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00330 ATGGCTGTGTTGATGGCAATTGTTTGTGTAATCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAGGTGGAATGAAGTAAGGTACAGGAAGAAAGGTTTACCTCCTGGCACAATGGGTTGGCCACTTTTTGGGGAGACAACTGATTTTCTTAAGCAGGGTCCAAACTTTATGAAAACACAGAGAGCAAGGTATGGCAGTTTTTTCAAATCCCACATACTGGGTTGTCCTACCATTGTGTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAGGCAAAAGGCCTTGTTCCTGGATACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTCGATCAGAGATCAGCTTTTGCCAAAAATTGATCAGTTCATGAGAGCCCACCTTAGCAACTGGGATCACAAAGTCATCAACATCCAAGAGAAAACCAAAGAGATGGCCTTCCTATCCTCTCTGAAGCAGATTGCTAGCATAGAATCTTGCTCATTCATGACAGAGTTCTTTAATCTAGTTCTTGGAACCCTCTCTCTTCCTATTAACCTTCCTGGGACAAATTACCACCGTGGATTCCAGGCAAGGAAGACTATAGTCAACATTGTGAGTAAGCTACTAGAGGAAAGGAGAGCATCCCAAGAAACCTACCATGACATGCTTGGTTGCTTGATGGGAAGAGATGGTGAAAGTAGATACAAACTAAGTGATGAAGAAATCATTGATCTAGTGATCACAATAATGTATTCTGGTTATGAAACTGTTTCAACTACATCCATGATGGCAGTGAAGTTCCTCCATGACCATCCCAAAGCACTTGAAGAACTAAGAAGAGAGCATTTGGCCATAAGAGAGAAGAAAAAGCCAGATGATCCACTTGACTTAAATGATCTCAAGTCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCAAGATTGGCCACAATAGTTAATGGGGTCCTAAGGAAAACTACTGAAGACATGGAACTAAACGGCTACTTGATTCCCAAAGGATGGAGAATATATGTGTACACAAGAGAGATAAATTATGACCCTTTTCTATATCCTGATCCCCTTACATTCAACCCATGGAGATGGATGGATAACAGTCTAGAGTCAAAACACTATTTCTTGATATTTGGAGGAGGCACCAGACATTGTCCAGGAAAAGAGTTGGGAATAACAGAAATTTCCACTTTCCTACACTATTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGAAAAACTAATGAAATTTCCCAGAGTTCAGGCACCAAATGGACTTCACATAAGGGTGACATCTTACTAA 1383 0.415 MAVLMAIVCVILVLCFCSALLRWNEVRYRKKGLPPGTMGWPLFGETTDFLKQGPNFMKTQRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKCNIAAVHGSTHKYMRGALLSIISPTSIRDQLLPKIDQFMRAHLSNWDHKVINIQEKTKEMAFLSSLKQIASIESCSFMTEFFNLVLGTLSLPINLPGTNYHRGFQARKTIVNIVSKLLEERRASQETYHDMLGCLMGRDGESRYKLSDEEIIDLVITIMYSGYETVSTTSMMAVKFLHDHPKALEELRREHLAIREKKKPDDPLDLNDLKSMRFTRAVIFETSRLATIVNGVLRKTTEDMELNGYLIPKGWRIYVYTREINYDPFLYPDPLTFNPWRWMDNSLESKHYFLIFGGGTRHCPGKELGITEISTFLHYFVTRYRWEEVGGEKLMKFPRVQAPNGLHIRVTSY 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00330 460 PANTHER CYTOCHROME P450 FAMILY PROTEIN 6 458 - -
Cca09g00330 460 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS E-class P450 group I signature 367 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS E-class P450 group I signature 400 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS E-class P450 group I signature 410 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS P450 superfamily signature 401 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 Pfam Cytochrome P450 177 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 403 412 IPR017972 GO:0005506|GO:0016705
Cca09g00330 460 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 SUPERFAMILY Cytochrome P450 27 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00330 460 PANTHER CYTOCHROME P450 26 6 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00330 Cca-Chr9 7738027 7741891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00330 81 460 Cytochrome P450 AT5G38970 69.251 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00330 K09590 - gmx:100805958 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00330 09 7738027 7741891 Cca07g02275 07 51193846 51197693 PCT