Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00321 ATGATGACCCAACCATCAGCAGCACCATTCAAAGTAATCCAAGTTTGTTCAGTTGCACCGCTTGAGGCACCAAAAACAAACCCTTCCACCACCGTGGCTCCAACCTCTCTCACGCTTACCTTCTTCGACCTCTTATGGCTCCGCTTCCCAGCCGCCCAATGTCTCTTCTTCTACTCCTTCCCACACCCAACCTCTTCATTCCACAActcccttctcccctctctcaaacactctctttctctcactctcCAACACTTCCTCCCTTTCGCTGGCACCATCACATGGCCCCACAACTCACCCTCACCCATTATCTCCTACGTCCCCGGCAACACTGTTCCCCTCACAATCGCCCAATCCAACGCTGACTTCGATACTCTCTCTTCCAACCTCTGTGAAGCACCCGAACGACACCGTTTCGTACCCCAGTTGACAACTTCCCATGAACAAGCTTCAGTCTTGGCACTTCAGGTCACAGTGTTCCCAAACACTGGCTTCTGCATTGGAATAACCACACACCATGCAGCTTTCGATGGAAAATCTTCAATCATGTTCATCAAATCATGGGCATACATATGCTCTAATCTTCAACACCCTACACCTTCACCGACCCTATCGTTACCTCAGCATCTCACACCTTTCTTTGACAGATCCGTGATAAGAGACCCTTCTGGACTAAGTGAAGCGTACGTGGCCACGTGGATGCATCACGGTGGTCCCAATAATCGAAGTCTCAAGGTGTGGGAGTCCATTATCACGACGTCAAACGATGGAGTCAAAGGTTTGTTTGAGTTAACCCCCTCACAGATTCTAAAGCTCAAGCAACATGCACAGTGTAAGATGAAAGTGGGTGTTCAGTTGTCAACGTTTTCTGTTACGAGTGCTTATGTGTTGACGTGTTTGCTCAGAGCTAAACAGCCAGCGGAAGATAATGTGTCTTTCGTATTTGCTGCGGACTGTAGATCGCGCTTGGACCCTCCAATTCCTGGAACGTATTTTGGAAACTGCGTTGCGTCCAAAAGGGTTAGGGCGGTGACAAAGAAGTTGGTGGGAAACGATGGGTTTGTTAGTGCTTTGGAGGGGATAGGTGAGGTTTTGAATAGTGTGAAGGATGGTGGAGTGCTAAGTGGAGCAGAATGTTGGGTTTCGGAAATGCATGAAAAAGTGGACGGAAGAATGTTCCCTTGTGCTGGATCGCCGCGGTTTGAGGTTTATAGTACTGATTTTGGGTGGGGAAGGCCTAAGAAAGTGGATATAACTTCCACAGACACAACAGGAGCATTTTCTTTTAGTCAGAGTAGGGATGACAGTGGAGGAGTTGAGATTGGACTGATGTTAGATAAACGTGAGATGGAAGATTTTACTACCTTTTTTGTACAAGGACTTGAATCCCTTTAA 1395 0.4609 MMTQPSAAPFKVIQVCSVAPLEAPKTNPSTTVAPTSLTLTFFDLLWLRFPAAQCLFFYSFPHPTSSFHNSLLPSLKHSLSLTLQHFLPFAGTITWPHNSPSPIISYVPGNTVPLTIAQSNADFDTLSSNLCEAPERHRFVPQLTTSHEQASVLALQVTVFPNTGFCIGITTHHAAFDGKSSIMFIKSWAYICSNLQHPTPSPTLSLPQHLTPFFDRSVIRDPSGLSEAYVATWMHHGGPNNRSLKVWESIITTSNDGVKGLFELTPSQILKLKQHAQCKMKVGVQLSTFSVTSAYVLTCLLRAKQPAEDNVSFVFAADCRSRLDPPIPGTYFGNCVASKRVRAVTKKLVGNDGFVSALEGIGEVLNSVKDGGVLSGAECWVSEMHEKVDGRMFPCAGSPRFEVYSTDFGWGRPKKVDITSTDTTGAFSFSQSRDDSGGVEIGLMLDKREMEDFTTFFVQGLESL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00321 464 Gene3D - 10 242 IPR023213 -
Cca09g00321 464 Gene3D - 254 464 IPR023213 -
Cca09g00321 464 PANTHER - 8 464 - -
Cca09g00321 464 Pfam Transferase family 28 454 - -
Cca09g00321 464 SUPERFAMILY CoA-dependent acyltransferases 285 421 - -
Cca09g00321 464 PANTHER MALONYL-COA:ISOFLAVONE 7-O-GLUCOSIDE MALONYLTRANSFERASE 8 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00321 Cca-Chr9 7511774 7513574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00321 26 459 Monolignol Biosynthesis Gene Families AT5G48930 24.000 2.81e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00321 - - gmx:100800849 644.81