Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00318 ATGAGTATCACCTCCGTAACACTCTTCCTCCTTCTCCACCTCTCCACACATCTCCAAGCGTACACCCCAGATGAAGTTTTCACCCTCAGTTGCGGCACCACCGGAAGATCCTTCGACGGAGAAAGGACATGGACGGGGGACTTAGATACAAAGTACTTATCTAGTCAAGACGGCACCGTTTCAGCTACTCCAACAACACAATCTTCTATAAATGAAATCCCCTTCACCACAGCACGCTTGTCCCGTTCCAATTTCAGTTATTCCTTCCCTGTCTCTGCAGGTCCTAAATTCCTTCGCCTCTTCTTCTACCCAGCTTCTTATCCTTCCTTTGCCCGCTCCCACGCCTCCTTCACTGTTCAATCAAACCAATTCACCCTCCTCGGCGCTTTCAATGCCTCTCTAAACGCAGACGCAGAAAGCACCGACACCATATTCAAAGAATATGTGGTCAACGTGGACACGGGTGATAGGCTCAACCTCAGCTTCACTCCGTCGCATCCAAACTCCTACGCTTTCATAAATGGAATCGAGGTATTGTCCATGCCAACCGATCTCTATTACACGTCACAAAATGACGTAGGATTCACGCAGGTGGGAAGTAACACGTTGTACAGTGTGGGAACGAGCTTTGCGCTGGGGACAGAGTATAGAATCAAAGTTGGAGGGCAAGCAATCTCGCCACGAAATGACAGCGGTTTGTTAAGGAATTGGGCTGGGCACGATCAAGATTATTTAATGACACAAAATTCACAGAATACTGATATAACCGTGAATAGGACCATAACCGTGAATCCTGATTACGTGGCACCCAAGGAGCTGTACAGAACAGCACGTGACATGGGCTCAAACGCCACTCTCAACAAAATCAGCAATCTCACTTGGGAGTTTCCCATTGATTCTGGTTTCACTTACATGCTCAGACTCCACTTTTGCGAACTTGACCCCAATATTACTAACATCGGTGACAGGGTTTTCTTTATTTACATAGCGACCAAGTTGGTCGAGGACGACGCAGATGTTATGAAATGGAGCCAGAATCAGAAAGGTCTCGCTGTGTACAAAAACTACGCCGTTTTGATTCCCAACAATAATGCTCACAAAAGGGTTAATCTTTCCCTCCAAATGCAtccttatgaaaatggtagctttacgagatacagtgatccgttcttgaacggtgtggAGATATTCAAAATCAGCGAGGCCGGGTCTAACAACCTCGCCGGACCTAACCCGGACCCACTTCAGACTCCACAGAGCAACATACCCGGCCAAAAGGGAAACAGCAGCAGCGTAAGCGGAACGACGATAATTGGCATCGTCGCGGGGGTGGTATCCGGCGTCGTTTTGATCTCCTTTGTGGTTTTCCTCGTCGTGTTCTTCCGACGCAAGAGAACCACTAATACGAAGAGCAAGGACTACAAATCCAAGTCAAGCACCACGCAGAAGTACTCCCTACCTTCCGATCTCTGTCGCCGCTTCTCCCTCATGGACATCAAATACgccaccaacaatttcgacgaggtcctgatcatcggcgtcgggggattcggccacgtgaacaaaggctacatcgacggcggtctcactccggtggccatcaagcgcctgaaaccggattcgcagcagggggcacaagagttcatgaacgaaatcgagaagctctcgcagctccgccacctccatctcaggccgtcgatgAACGACATCGTTTGGATGCTTGAGTTTGCGCTGCAGTTGCAAGATAGTGCGGAAGAACGTGAAAATGCTCGTTTTGTCATTGAAGAAGATAATGAAAGAGAGGAAGTTAATGACTACGCATGTTGTGGTAGTAGTGCGGTGAATGTGAGTACAAGTAGCGCTGGCTGA 1869 0.4125 MSITSVTLFLLLHLSTHLQAYTPDEVFTLSCGTTGRSFDGERTWTGDLDTKYLSSQDGTVSATPTTQSSINEIPFTTARLSRSNFSYSFPVSAGPKFLRLFFYPASYPSFARSHASFTVQSNQFTLLGAFNASLNADAESTDTIFKEYVVNVDTGDRLNLSFTPSHPNSYAFINGIEVLSMPTDLYYTSQNDVGFTQVGSNTLYSVGTSFALGTEYRIKVGGQAISPRNDSGLLRNWAGHDQDYLMTQNSQNTDITVNRTITVNPDYVAPKELYRTARDMGSNATLNKISNLTWEFPIDSGFTYMLRLHFCELDPNITNIGDRVFFIYIATKLVEDDADVMKWSQNQKGLAVYKNYAVLIPNNNAHKRVNLSLQMHPYENGSFTRYSDPFLNGVEIFKISEAGSNNLAGPNPDPLQTPQSNIPGQKGNSSSVSGTTIIGIVAGVVSGVVLISFVVFLVVFFRRKRTTNTKSKDYKSKSSTTQKYSLPSDLCRRFSLMDIKYATNNFDEVLIIGVGGFGHVNKGYIDGGLTPVAIKRLKPDSQQGAQEFMNEIEKLSQLRHLHLRPSMNDIVWMLEFALQLQDSAEERENARFVIEEDNEREEVNDYACCGSSAVNVSTSSAG 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00318 622 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 13 563 - -
Cca09g00318 622 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 564 587 - -
Cca09g00318 622 Gene3D - 213 400 - -
Cca09g00318 622 Gene3D - 24 182 - -
Cca09g00318 622 Gene3D Phosphorylase Kinase; domain 1 465 565 - -
Cca09g00318 622 SUPERFAMILY Protein kinase-like (PK-like) 474 563 IPR011009 -
Cca09g00318 622 PANTHER OS07G0166700 PROTEIN 564 587 IPR045272 GO:0004714|GO:0006468
Cca09g00318 622 PANTHER OS07G0166700 PROTEIN 13 563 IPR045272 GO:0004714|GO:0006468
Cca09g00318 622 Pfam Malectin-like domain 29 399 IPR024788 -
Cca09g00318 622 ProSitePatterns Protein kinases ATP-binding region signature. 512 535 IPR017441 GO:0005524
Cca09g00318 622 MobiDBLite consensus disorder prediction 407 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00318 Cca-Chr9 7434648 7437128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00318 21 563 Receptor kinase-like Gene Family AT3G51550 42.341 2.42e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Cca09g00318 Malectin_like 2.2e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00318 - - gmx:100799780 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00318 09 7434648 7437128 Cca09g00318 09 7434648 7437128 ECH