Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00312 ATGCAAGTAACAGAATTAGAATTCTGGCAAGTTGTGAATCCTCTCTTCAGGCTTGGGTGGAAGCATTGGATTGGTGCAGTTGTTTTCATATGGGCTTGGATTCATCAACTCCAGTGCCATAGGATTCTTAGTGGATTCACCTCAGAGCCTTCACTTTGTGGGTTTGTGTCGTTATCAGATTCATTTGGATATTCATGGATTGTAGCTATTACTCTTTCTCAAGAATGTGTTGTGCTTGAGATGAAAAGTTGGAACCTCTTGCTTCCTGACCACCACGCCCGCCCCAACGCCACCTCCGCCTCTGCCGGCGACGGGGCCACAATTGAAGTGGTCAGGCGCCCCAGGGGCCGCCTTCCTGGCTCCAAAAACAAGCCCAAACTGCCACTCGTTATAACCCGGGAGCCCGAGCCCGCTATAACCCCTTTTATTTTAGAAATCTCAGGCGGAAGCGACGTGGTCGAGGCCCTAGCCCGGTTTAGCCGCAGAGAACACGGGCCTATGCGTCCTGTCTGGTTCGGGAACCGTCACCAACGTCACTCTCCGTCAACCCCGGTGCCACCATCACTTTCCATGGCCGTTTTGATGTCCTCTCCCTCTCCGCCACGCTCCTCCTCCACGACTCGCTGGCAATCGCGCTCTCTGCCTTCGCCGTCTCGCTCGCTGGCCCGCAGGACCAGATCGTCGGCGTGA 690 0.5478 MQVTELEFWQVVNPLFRLGWKHWIGAVVFIWAWIHQLQCHRILSGFTSEPSLCGFVSLSDSFGYSWIVAITLSQECVVLEMKSWNLLLPDHHARPNATSASAGDGATIEVVRRPRGRLPGSKNKPKLPLVITREPEPAITPFILEISGGSDVVEALARFSRREHGPMRPVWFGNRHQRHSPSTPVPPSLSMAVLMSSPSPPRSSSTTRWQSRSLPSPSRSLARRTRSSA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00312 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 93 163 - -
Cca09g00312 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 93 163 IPR014476 GO:0003680
Cca09g00312 229 MobiDBLite consensus disorder prediction 176 229 - -
Cca09g00312 229 MobiDBLite consensus disorder prediction 166 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00312 Cca-Chr9 7356672 7358903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00312 104 163 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 61.667 6.81e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00312 - - adu:107460948 108.612