Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00298 ATGTCTAGAAAGGTTTTGACATCAATGAAGGATGAAAATCCAGATTTGCATAAGCAAATTGGGTGCATCAGTGGGTTTTTTCAGCTGTTTGATCGCCACAGGTTCCTCACAGGCCAACGCAGTTGCAGCAACAATCAGAACACACCAACTAAAGATGGAACCAACAACCACATCAAAGAGCTGAATAATGCAACTCAAAAGGCAACGGCAAATAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCAATGTCTTCATCGTCTCGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACAATTCATATAGAACCACCATCCATCAGTCAAATCAAAATTCCAGAAAACTCTAATTCAGCAGCAGCAGCAATGAAGCAAGGCAACCAAGGCCATCAATCCCTTGATTTCTATGATATTGTCAAAGAATCAATGCATAGAGATGTTCATGGATTGTCAGTGAGAACTGTGGCTAAAGAGGAAAAGAAGGGTCGTATCTTGAAATACATTGACTCTCCAAGGCCTTTGGAGTCTCCAAAATCTGTCAATACAAGAGTTATGGCTGCTTGGGATTCTCCAAGACTCTCTTATGATGGGAGGGATACACAAGACACATTCAAATCTGCTACAAAGCCTAGGGAACTTCCAAGGCTTTCCTTGGATAGCAGAGAAGGGTCCATCAAAAGCTTCAATGAAGGAACAAAATCTCGCAGCCTTTTAAAGGGTCCACAGAAAGGGTATGGTAGCTCAAGCACAATGCTTAAGCAGCTGCAGGAAGCAGAAACTTCTAGAAGACCATCCAGTGTTGTAGCAAGGTTAATGGGACTAGAAGCCTTCCCAGACTGTGCACAAACTTGTGATACTCCAAGAGGGATCTCTGGCTGCCCCACCAACAAAAATGAGACCTTTGCAGATAGTAAGTACGAGCTGCACCAAGGTGAAGCATCCCTGAGAACAAACAAGGGGTCTACCTTGCATGAGTCTAGGAGGGATGCTTCAATCCTGAACATGACACCACATTCACGGTTTTCCCTCGAACCAACTCCATGGAGGCAACCTGAAGCAAGCAAAGGTTCTCAATTACAGGCTTCCAAGAGAAGTGAATCTTCTGCAAAAGCATCAAACCTGTCCCTCTCTGTATATGGGGAAATTGAAAAGAGGATAGCAGATCTAGAGTTCAAAAATTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTAGATACAAAAACAGATCAGGCTTCAAATTTTCCGTCCGACAATAGGAGTAATAGCAGTCTCAGTGAAACCTCAATTTTACAAAGCCCAAGAATGCGACAGAAGGACCCAACATCCACCACTCTTGAGATGTCAAATTCAAGCCAGTGTAGTAAATCACCAATTTTCATCATGAAACCAGCGAAAGCTACAAGAAAAACCAATAATCCTGCCTTCACAGAAATGTCATTGCATGGTAAATCAAGCCCCAACAAGTTTAGCCCTGGTAACCCTGCAAATGGAATATTGGTTGACAAGCTTGACAGGCAAACAGCAAAAGGTATCAGTCAAGCAATCAGACATGCCAAGAATCCCATCAGCCAACCCTTTCATTCAGTGGATAAGAGTAGTAAGATGAAAACTTCAAAATTGATGCAATCCTCAAAAGTTCCTCAAATTAATGGAGAAAATGCCACCAACTCTTGCAATACAGCAGAGGCTAGGAGCCCAAGACTACAAAAGAAGTTTGGTTTGGAGAAGCGTTCTCTGCCAACTAGCCCATCATCAGATTCCAGCAATAACAGAAGACAACACAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACAACACCCAGAAAAAAGTCCTCTACTTTGCAGAAAAAAAATGAACATTTCAGTGATATCAGCAATCAAAGGAGGGATTTTAAGCATGAAGTTGATGTTTTTTCACCAGATTTTGGCAGTAAGAGAAGCATGGACTCATACAGCCGTGATGTAGAAATCATTCACATTGATCATTCTGATAAGATCATTGGCAACTCCATCCAGCTAAAAAGCCTAGATCAAAATAATGCGGGAAAAGATCTGAGCCAGGAAAGCTTTATGGCTGAGAAAATAATTACGGCAGAACAACCAAGTCCTGTGTCTGTTCTTGATGCCGCTTTCTACAGAGAAGAACCACCTTCTCCAGTTAAAAAGAAATCAGACATCTCAAAAGATTTAGATGAAGCTCTGAATACTTATGATAGTAGTGAGGAGAACTCAGAAGACCTTCCTCTTTCATCCAACAGTGCAAAAGCCAACTTCAGTAGTGGAATTAATGATACTTACTTGAAAACTCAAAATTTGGTCCAATTTCTTCAACAAATTGACTACAATGATGAGAGATTGACCAATTTCAGAGATGATAAAGATCCAGACCATAAATATGTATCAGAAATACTGTTAGCATCAGGGCTACTCAGCAATCCAAGCTCTAACCAGGTTTTTCATTCATCAAGCTATCCTATAAACCCAAAGTTGTTCCTTGCACTAGAGCAAATCAAGACAAACAAAATGGGTTTCGATATTGAAAACAATGCCAAGAAGATTGCTGGGCTGCATAGTCCTGATCAAATGCAAAGAAAGCTGATATTTGATGTCATTAATGACATTCTAGCTCAGAAACTAATATTTGAAAGTACTACTCTGTGGTGCCAACCAGATCAGCCAGCAGGTAGAAAACTAAGAGGACAGCTGCTTTTGGATGAGCTTTGCACAGAAATTGATAAATTACAGCATAGAAATAGGAATGTCAACCTGGATAATGAGGATGAGAATTTGGCAAATCTCCTGTGGGAAGAGATTATGCACTGCCCCACAATTTACACAAAAAGTTACAGTGCAATACCAGATGTCGTGCTGGATATTGAAAGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTAGCTAACCATTCTGGTAAGCATTGCAGACAACTGCTGTTTCCCAAGTAG 3039 0.4074 MSRKVLTSMKDENPDLHKQIGCISGFFQLFDRHRFLTGQRSCSNNQNTPTKDGTNNHIKELNNATQKATANNVKVARENQQFSTESSGTSMSSSSRSSSMSSLEFNRTIHIEPPSISQIKIPENSNSAAAAMKQGNQGHQSLDFYDIVKESMHRDVHGLSVRTVAKEEKKGRILKYIDSPRPLESPKSVNTRVMAAWDSPRLSYDGRDTQDTFKSATKPRELPRLSLDSREGSIKSFNEGTKSRSLLKGPQKGYGSSSTMLKQLQEAETSRRPSSVVARLMGLEAFPDCAQTCDTPRGISGCPTNKNETFADSKYELHQGEASLRTNKGSTLHESRRDASILNMTPHSRFSLEPTPWRQPEASKGSQLQASKRSESSAKASNLSLSVYGEIEKRIADLEFKNSGKDLRALKQILDAMQRYKESLDTKTDQASNFPSDNRSNSSLSETSILQSPRMRQKDPTSTTLEMSNSSQCSKSPIFIMKPAKATRKTNNPAFTEMSLHGKSSPNKFSPGNPANGILVDKLDRQTAKGISQAIRHAKNPISQPFHSVDKSSKMKTSKLMQSSKVPQINGENATNSCNTAEARSPRLQKKFGLEKRSLPTSPSSDSSNNRRQHNRQSVELSSPSTTPRKKSSTLQKKNEHFSDISNQRRDFKHEVDVFSPDFGSKRSMDSYSRDVEIIHIDHSDKIIGNSIQLKSLDQNNAGKDLSQESFMAEKIITAEQPSPVSVLDAAFYREEPPSPVKKKSDISKDLDEALNTYDSSEENSEDLPLSSNSAKANFSSGINDTYLKTQNLVQFLQQIDYNDERLTNFRDDKDPDHKYVSEILLASGLLSNPSSNQVFHSSSYPINPKLFLALEQIKTNKMGFDIENNAKKIAGLHSPDQMQRKLIFDVINDILAQKLIFESTTLWCQPDQPAGRKLRGQLLLDELCTEIDKLQHRNRNVNLDNEDENLANLLWEEIMHCPTIYTKSYSAIPDVVLDIERLIFKDLITEVVRSELANHSGKHCRQLLFPK 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00298 1012 Pfam Domain of unknown function (DUF4378) 817 991 IPR025486 -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 633 648 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 424 473 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 427 473 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 529 648 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 205 228 - -
Cca09g00298 1012 Coils Coil 744 764 - -
Cca09g00298 1012 PANTHER LONGIFOLIA PROTEIN 1 1011 - -
Cca09g00298 1012 Coils Coil 410 430 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 231 272 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 318 381 - -
Cca09g00298 1012 PANTHER LONGIFOLIA PROTEIN 1 1011 IPR033334 GO:0051513
Cca09g00298 1012 MobiDBLite consensus disorder prediction 79 103 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 598 632 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 545 584 - -
Cca09g00298 1012 Coils Coil 58 78 - -
Cca09g00298 1012 Coils Coil 925 945 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 360 381 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 336 352 - -
Cca09g00298 1012 MobiDBLite consensus disorder prediction 205 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00298 Cca-Chr9 7135688 7141480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00298 1 998 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.406 2.02e-89 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00298 - - gmx:100793602 1512.66