Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00264 ATGGAGAAATGGAGTGTTTCGACGACGACATTAGCGGCGAGCACGGCGGTAATGGGGTGGCTGTTGTTGGTGGTCATGGGAGGTCCGGTGCTTCATAAGGTGGGAGGATCAAGAGGTTGGATTGATCATGATGTCAACTACACTGAATGGTCTTCTCAACAGCATGTCTATGTTGGAGATTGGCTTTTGTTCATGTTCGACAAACGTTACTTCAACGTTCTGGAAGTGAACAAGACAAGCTACGAGAAGTGCGAAGAGAGGGATTTCATGAAGAACGTGACGCGCGGTGGCCGCGACGTGGTGCAGTTGACAGAGGCAAAGACCTACTACTTCCTCTCCGCCGGAGGATACTGTTTTCACGGCATGAAGGTTGCTGTCAACGTCCAACAACACCAGCAACCCGCCGAACCCTCTCCGGCTCCGGCTCCGGCTCCGTCGTCTGCGGCCGTGTCTCCTGCTTTTTGGCCCTCCATCGTCACCGGTGTTTGGATCATGGTTGCTCATGTCAAGCTGGTTTTGATGGGCTAG 528 0.5322 MEKWSVSTTTLAASTAVMGWLLLVVMGGPVLHKVGGSRGWIDHDVNYTEWSSQQHVYVGDWLLFMFDKRYFNVLEVNKTSYEKCEERDFMKNVTRGGRDVVQLTEAKTYYFLSAGGYCFHGMKVAVNVQQHQQPAEPSPAPAPAPSSAAVSPAFWPSIVTGVWIMVAHVKLVLMG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00264 175 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
Cca09g00264 175 PANTHER BLUE COPPER PROTEIN 11 141 IPR039391 GO:0009055
Cca09g00264 175 PANTHER EARLY NODULIN-LIKE PROTEIN 20 11 141 - -
Cca09g00264 175 Pfam Plastocyanin-like domain 41 122 IPR003245 GO:0009055
Cca09g00264 175 Gene3D - 31 140 IPR008972 -
Cca09g00264 175 SUPERFAMILY Cupredoxins 31 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00264 Cca-Chr9 6283048 6286180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00264 21 173 Phytocyanin Superfamily AT2G27035 42.208 6.53e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00264 - - gmx:100788336 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00264 09 6283048 6286180 Cca09g00264 09 6283048 6286180 ECH