Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00239 ATGGGAATTGACCCTGTGACGCACAAGCCAAAAAATGATGCCCTTCTCTCTAGTGACGGTCAATCCAAAACCGCTGCAAATCTCAGCCACATGGCTCAGTGGGAGAGTGCTCGCCTTGAAGCTGAAGCAAGACTAGTGAGAGAATCAAAGCTACGTTCACATTCACTGAAACACCAACAACTTGGAAGTTCTTCTACATTTGCATCTTCATCATCAGCATCAACCTCAGCTAACAATAAaccagaagcaccaccgccaccgccgccgccaccaccGTCATCGTCGCATTTGCCTTCACGATCTTCCCTTGATGTTCTCAAGGCTTGGAATAATGGAGGGTGGTTAAAATCCAATGAAGGAAATGGTGGCATTGCAAGCACAGTTGGGGTAAGTGGTGACCTTGAGTCTCCTACCTCTACACTATCTTTCTCCGAGAATGCACCACCAATTATGAATGCAACTGGAGGAGAAAATAACAacaacaacaatcacaatgataatgcaatgccaatgaTTGAGTTTGTGGGTAGTTCAGGTAATTCTTCATCTCTTGTGAAAGAAGAAGGTGAACAAGAGTGGAAAGGTTATGATAGTTCCATCACTACTTTTAGTTCTGGCCTGCATGAGTTCACAATGTCCATGGAAGGCACGTGGGCCTCTGAGTCTCTTAGGGCTAGTGGTTCACATGATGATGCCATTGTTGAAGAAGGGTTCACCAATCTTCTGCTAAAGACAAACTCCGACGACCTAAGTTTGTCGTCAGAGGGTGGAGGAGAGTCTAACAACGGCGACGGTGATGGTGGTAGTAACAGTGAATTTTATGAAGATAACAATAATTATTGGAATAGCATTCTCAATTTAGTGAATTCTTCCCCTTCTCATTCCCCTATGTTCTAA 897 0.4025 MGIDPVTHKPKNDALLSSDGQSKTAANLSHMAQWESARLEAEARLVRESKLRSHSLKHQQLGSSSTFASSSSASTSANNKPEAPPPPPPPPPSSSHLPSRSSLDVLKAWNNGGWLKSNEGNGGIASTVGVSGDLESPTSTLSFSENAPPIMNATGGENNNNNNHNDNAMPMIEFVGSSGNSSSLVKEEGEQEWKGYDSSITTFSSGLHEFTMSMEGTWASESLRASGSHDDAIVEEGFTNLLLKTNSDDLSLSSEGGGESNNGDGDGGSNSEFYEDNNNYWNSILNLVNSSPSHSPMF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00239 298 MobiDBLite consensus disorder prediction 80 96 - -
Cca09g00239 298 MobiDBLite consensus disorder prediction 1 30 - -
Cca09g00239 298 MobiDBLite consensus disorder prediction 114 163 - -
Cca09g00239 298 MobiDBLite consensus disorder prediction 14 30 - -
Cca09g00239 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 73 - -
Cca09g00239 298 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 129 294 - -
Cca09g00239 298 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 73 - -
Cca09g00239 298 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 129 294 - -
Cca09g00239 298 MobiDBLite consensus disorder prediction 49 100 - -
Cca09g00239 298 MobiDBLite consensus disorder prediction 56 79 - -
Cca09g00239 298 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00239 Cca-Chr9 5782628 5785692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00239 1 298 MYB Transcription Factor Family AT3G01140 39.667 5.73e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00239 K09422 - gmx:100101835 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00239 09 5782628 5785692 Cca09g00239 09 5782628 5785692 ECH