Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00195 ATGGGGTTTGGGAGTAATGCAGTTCAGGCAGGGAGTTTGGATGTGGACAAGTCAAAGAAGAAGGAAGGTGGTGGAAGGGAGAGAAAATGGTGGTTTAGATTTAGCCTCTTTGGAAGCTGCATACCTACAAGATCAAAAGTTGATAGCACCATAAGTGGCACTAGTGCCCATAATGGTGAAAATGTCAAGTCAGCGACAATTAGATCAGAGGAAAACAAATCTGCATCTGATAAAATAACAAAGGAAACAGTTGCTCCTCAAGAGTCCTCTACGAGAACTAGTGATGCAGAAAGTAGCCCTTCCACTCCAAAATTTAGTGAGGAGTTGAAGGTTGCTTCTTGTTTGAGAAAATTTACATTCAATGGGCTTAAGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGATTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCGGGTACAGGGCTCACAGTGGCAGTCAAGACCCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAATTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGCATTGAAGATGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAACCACCTCTTTAGAAGGCCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCGCTTGGTGCTGCGAAAGGTCTTGCTTTTCTCCACGAAGAAGCTCAGAGGCCCATAATATATCGTGATTTCAAAACATCTAATATACTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCCGAGGGGGAGAAGACCCATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCTGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTCACAGGCCGGCGATCTATTGATAAGAGAAGACCAAACGGTGAACACAATCTTGTGGAGTGGGCGAGACCTGTACTCAGGGACCGGAGGACAGTCTACCGGATAATTGATCCCCGCCTTGAAGGCCACTTCTCGGTTAAAGGAGCACAGAAAGCTGCCCAGCTGGCTGCTCAATGCCTTAGCCGTGATCCGAAATCTAGACCCTTGATGAGTGAAGTTGTTCAAACTTTAAAGCCTTTGCCAAGCCTCAAGGACATGGCTATCTCATCTTATCACTTCCAGATTAATCGAGTAGACCGAACCATGTCCATGCCAAATCATAAAAATGGCATTAGATCACAGTTAGTATCTGTACCTAGGAAGGGTCAACCTGTGAGGACCTTGTCTAGTCCAAATGGTACACATGGTTCTCCATATCTTCATTATACCAAATCTCCAAAGCCCATTGGGGTATCATTGAAGTCTTCTTGTCATTATATAATCTCAAATAAGGTTTCCTTCTTTTCAGAATGTATTTCTTGTAAAGAAGAAAAAAATTGTGGTGTTGAGTTAGGGGTTATTGATACTAAGATTCAATACAGCGTTTCTCTCCGAAAAGAATTGAAGGATGGGTCAAGCATTCGGTTGTTATCAAGTAGATCAATTGCTGGTCGTTTGTCACTGCGTGTGCAGCAACTTGATGTTCGATGTGAGACAAAAACAAAGGATAATGTCTTTGTCACTGTGGTTGCATCTGTGCAATATCGTGCTGTGTCTGAGAAAGCTTCTGATGCATTCTATAGGCTTACCAACACACGGGAGCAGATCCAATCATACGTGTTTGATGTTATCAGGGCCAGTGTACCAAAATTGGAGTTGGATTCTGTCTTTGAGCAGAAAAATGATATCGCAAAGGCTGTAGAGGAGGAGCTTGAGAAGGCCATGTCAACTTATGGATATGAGATAGTCCAGACCCTCATTGTGGATATAGAGCCTGATGTTAATGTCAAGAGAGCAATGAACGAGATTAATGCAGCTGCTAGATTGAGGTTGGCTGCAAATGAGAAGGCTGAAGCGGAAAAAATTCTGCAGATCAAGAAAGCTGAGGGAGAAGCAGAATCCAAATATCTGTCAGGACTCGGTATAGCTCGCCAACGTCAGGCCATTGTGGATGGACTGAGGGACAGTGTTCTTGCATTCTCTGAGAATGTGCCCGGGACAACAGCTAAAGACGTCATGGACATGGTGCTGGTGACTCAGTACTTTGACACCATGAAGGAGATAGGGGCATCTTCAAAGTCTTCATCAGTGTTCATACCACACGGTCCTGGTGCGGTTAAGGACATCGCTGTGCAGATTCGGGATGGTCTTCTTCAGGCAAGCGCGACAAATTAA 2373 0.4391 MGFGSNAVQAGSLDVDKSKKKEGGGRERKWWFRFSLFGSCIPTRSKVDSTISGTSAHNGENVKSATIRSEENKSASDKITKETVAPQESSTRTSDAESSPSTPKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKRRPNGEHNLVEWARPVLRDRRTVYRIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVQTLKPLPSLKDMAISSYHFQINRVDRTMSMPNHKNGIRSQLVSVPRKGQPVRTLSSPNGTHGSPYLHYTKSPKPIGVSLKSSCHYIISNKVSFFSECISCKEEKNCGVELGVIDTKIQYSVSLRKELKDGSSIRLLSSRSIAGRLSLRVQQLDVRCETKTKDNVFVTVVASVQYRAVSEKASDAFYRLTNTREQIQSYVFDVIRASVPKLELDSVFEQKNDIAKAVEEELEKAMSTYGYEIVQTLIVDIEPDVNVKRAMNEINAAARLRLAANEKAEAEKILQIKKAEGEAESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDIAVQIRDGLLQASATN 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00195 790 SUPERFAMILY Band 7/SPFH domain 551 676 IPR036013 -
Cca09g00195 790 SMART PHB_4 489 670 IPR001107 -
Cca09g00195 790 MobiDBLite consensus disorder prediction 79 104 - -
Cca09g00195 790 MobiDBLite consensus disorder prediction 64 78 - -
Cca09g00195 790 Gene3D Phosphorylase Kinase; domain 1 114 215 - -
Cca09g00195 790 CDD STKc_IRAK 136 413 - -
Cca09g00195 790 Pfam Protein kinase domain 133 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00195 790 Coils Coil 623 643 - -
Cca09g00195 790 MobiDBLite consensus disorder prediction 1 25 - -
Cca09g00195 790 ProSiteProfiles Protein kinase domain profile. 130 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00195 790 MobiDBLite consensus disorder prediction 48 63 - -
Cca09g00195 790 Coils Coil 675 695 - -
Cca09g00195 790 MobiDBLite consensus disorder prediction 456 472 - -
Cca09g00195 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Cca09g00195 790 CDD SPFH_like_u4 549 783 - -
Cca09g00195 790 PANTHER OS01G0588500 PROTEIN-RELATED 82 475 - -
Cca09g00195 790 ProSitePatterns Protein kinases ATP-binding region signature. 136 168 IPR017441 GO:0005524
Cca09g00195 790 Pfam SPFH domain / Band 7 family 547 687 IPR001107 -
Cca09g00195 790 MobiDBLite consensus disorder prediction 453 473 - -
Cca09g00195 790 SUPERFAMILY Protein kinase-like (PK-like) 105 410 IPR011009 -
Cca09g00195 790 MobiDBLite consensus disorder prediction 48 104 - -
Cca09g00195 790 Gene3D Band 7 domain 547 672 IPR036013 -
Cca09g00195 790 PANTHER RECEPTOR-LIKE KINASE PLANT 82 475 - -
Cca09g00195 790 Gene3D Transferase(Phosphotransferase) domain 1 216 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00195 Cca-Chr9 4040055 4060528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00195 116 426 Glycoside Hydrolase AT3G07070 55.414 7.38e-112 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Cca09g00195 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00195 - - gmx:100499647 875.159