Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca09g00195 | ATGGGGTTTGGGAGTAATGCAGTTCAGGCAGGGAGTTTGGATGTGGACAAGTCAAAGAAGAAGGAAGGTGGTGGAAGGGAGAGAAAATGGTGGTTTAGATTTAGCCTCTTTGGAAGCTGCATACCTACAAGATCAAAAGTTGATAGCACCATAAGTGGCACTAGTGCCCATAATGGTGAAAATGTCAAGTCAGCGACAATTAGATCAGAGGAAAACAAATCTGCATCTGATAAAATAACAAAGGAAACAGTTGCTCCTCAAGAGTCCTCTACGAGAACTAGTGATGCAGAAAGTAGCCCTTCCACTCCAAAATTTAGTGAGGAGTTGAAGGTTGCTTCTTGTTTGAGAAAATTTACATTCAATGGGCTTAAGGTGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGATTTGGTTGTGTCTTCAAGGGTTGGATTGAGGAGAATGGAACTGCACCTGTGAAACCGGGTACAGGGCTCACAGTGGCAGTCAAGACCCTCAACCACAATGGACATCAGGGTCACAAAGAGTGGCTTGCTGAATTAAATTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAATTGATTGGTTTCTGCATTGAAGATGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGAGGCAGTTTGGAGAACCACCTCTTTAGAAGGCCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCGCTTGGTGCTGCGAAAGGTCTTGCTTTTCTCCACGAAGAAGCTCAGAGGCCCATAATATATCGTGATTTCAAAACATCTAATATACTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCCGAGGGGGAGAAGACCCATGTATCAACAAGAGTTATGGGAACATATGGTTATGCTGCTCCTGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTCACAGGCCGGCGATCTATTGATAAGAGAAGACCAAACGGTGAACACAATCTTGTGGAGTGGGCGAGACCTGTACTCAGGGACCGGAGGACAGTCTACCGGATAATTGATCCCCGCCTTGAAGGCCACTTCTCGGTTAAAGGAGCACAGAAAGCTGCCCAGCTGGCTGCTCAATGCCTTAGCCGTGATCCGAAATCTAGACCCTTGATGAGTGAAGTTGTTCAAACTTTAAAGCCTTTGCCAAGCCTCAAGGACATGGCTATCTCATCTTATCACTTCCAGATTAATCGAGTAGACCGAACCATGTCCATGCCAAATCATAAAAATGGCATTAGATCACAGTTAGTATCTGTACCTAGGAAGGGTCAACCTGTGAGGACCTTGTCTAGTCCAAATGGTACACATGGTTCTCCATATCTTCATTATACCAAATCTCCAAAGCCCATTGGGGTATCATTGAAGTCTTCTTGTCATTATATAATCTCAAATAAGGTTTCCTTCTTTTCAGAATGTATTTCTTGTAAAGAAGAAAAAAATTGTGGTGTTGAGTTAGGGGTTATTGATACTAAGATTCAATACAGCGTTTCTCTCCGAAAAGAATTGAAGGATGGGTCAAGCATTCGGTTGTTATCAAGTAGATCAATTGCTGGTCGTTTGTCACTGCGTGTGCAGCAACTTGATGTTCGATGTGAGACAAAAACAAAGGATAATGTCTTTGTCACTGTGGTTGCATCTGTGCAATATCGTGCTGTGTCTGAGAAAGCTTCTGATGCATTCTATAGGCTTACCAACACACGGGAGCAGATCCAATCATACGTGTTTGATGTTATCAGGGCCAGTGTACCAAAATTGGAGTTGGATTCTGTCTTTGAGCAGAAAAATGATATCGCAAAGGCTGTAGAGGAGGAGCTTGAGAAGGCCATGTCAACTTATGGATATGAGATAGTCCAGACCCTCATTGTGGATATAGAGCCTGATGTTAATGTCAAGAGAGCAATGAACGAGATTAATGCAGCTGCTAGATTGAGGTTGGCTGCAAATGAGAAGGCTGAAGCGGAAAAAATTCTGCAGATCAAGAAAGCTGAGGGAGAAGCAGAATCCAAATATCTGTCAGGACTCGGTATAGCTCGCCAACGTCAGGCCATTGTGGATGGACTGAGGGACAGTGTTCTTGCATTCTCTGAGAATGTGCCCGGGACAACAGCTAAAGACGTCATGGACATGGTGCTGGTGACTCAGTACTTTGACACCATGAAGGAGATAGGGGCATCTTCAAAGTCTTCATCAGTGTTCATACCACACGGTCCTGGTGCGGTTAAGGACATCGCTGTGCAGATTCGGGATGGTCTTCTTCAGGCAAGCGCGACAAATTAA | 2373 | 0.4391 | MGFGSNAVQAGSLDVDKSKKKEGGGRERKWWFRFSLFGSCIPTRSKVDSTISGTSAHNGENVKSATIRSEENKSASDKITKETVAPQESSTRTSDAESSPSTPKFSEELKVASCLRKFTFNGLKVATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAAKGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKRRPNGEHNLVEWARPVLRDRRTVYRIIDPRLEGHFSVKGAQKAAQLAAQCLSRDPKSRPLMSEVVQTLKPLPSLKDMAISSYHFQINRVDRTMSMPNHKNGIRSQLVSVPRKGQPVRTLSSPNGTHGSPYLHYTKSPKPIGVSLKSSCHYIISNKVSFFSECISCKEEKNCGVELGVIDTKIQYSVSLRKELKDGSSIRLLSSRSIAGRLSLRVQQLDVRCETKTKDNVFVTVVASVQYRAVSEKASDAFYRLTNTREQIQSYVFDVIRASVPKLELDSVFEQKNDIAKAVEEELEKAMSTYGYEIVQTLIVDIEPDVNVKRAMNEINAAARLRLAANEKAEAEKILQIKKAEGEAESKYLSGLGIARQRQAIVDGLRDSVLAFSENVPGTTAKDVMDMVLVTQYFDTMKEIGASSKSSSVFIPHGPGAVKDIAVQIRDGLLQASATN | 790 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca09g00195 | 790 | SUPERFAMILY | Band 7/SPFH domain | 551 | 676 | IPR036013 | - | |
Cca09g00195 | 790 | SMART | PHB_4 | 489 | 670 | IPR001107 | - | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 79 | 104 | - | - | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 64 | 78 | - | - | |
Cca09g00195 | 790 | Gene3D | Phosphorylase Kinase; domain 1 | 114 | 215 | - | - | |
Cca09g00195 | 790 | CDD | STKc_IRAK | 136 | 413 | - | - | |
Cca09g00195 | 790 | Pfam | Protein kinase domain | 133 | 408 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g00195 | 790 | Coils | Coil | 623 | 643 | - | - | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cca09g00195 | 790 | ProSiteProfiles | Protein kinase domain profile. | 130 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 48 | 63 | - | - | |
Cca09g00195 | 790 | Coils | Coil | 675 | 695 | - | - | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 456 | 472 | - | - | |
Cca09g00195 | 790 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 259 | 271 | IPR008271 | GO:0004672|GO:0006468 | |
Cca09g00195 | 790 | CDD | SPFH_like_u4 | 549 | 783 | - | - | |
Cca09g00195 | 790 | PANTHER | OS01G0588500 PROTEIN-RELATED | 82 | 475 | - | - | |
Cca09g00195 | 790 | ProSitePatterns | Protein kinases ATP-binding region signature. | 136 | 168 | IPR017441 | GO:0005524 | |
Cca09g00195 | 790 | Pfam | SPFH domain / Band 7 family | 547 | 687 | IPR001107 | - | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 453 | 473 | - | - | |
Cca09g00195 | 790 | SUPERFAMILY | Protein kinase-like (PK-like) | 105 | 410 | IPR011009 | - | |
Cca09g00195 | 790 | MobiDBLite | consensus disorder prediction | 48 | 104 | - | - | |
Cca09g00195 | 790 | Gene3D | Band 7 domain | 547 | 672 | IPR036013 | - | |
Cca09g00195 | 790 | PANTHER | RECEPTOR-LIKE KINASE PLANT | 82 | 475 | - | - | |
Cca09g00195 | 790 | Gene3D | Transferase(Phosphotransferase) domain 1 | 216 | 431 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca09g00195 | Cca-Chr9 | 4040055 | 4060528 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca09g00195 | 116 | 426 | Glycoside Hydrolase | AT3G07070 | 55.414 | 7.38e-112 | 345 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Cca09g00195 | Pkinase | 1.4e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca09g00195 | - | - | gmx:100499647 | 875.159 |