Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00192 ATGGAGATACCGGAAGCCATGGACGCTCTTGTACAAAGAGCAGCGTTCGTGAAGGAGTCACTTCACAAGAGTCAGACCATCACCGATAACATGGTCTCCATTCTTGGTTCCTTCGATCACCGCCTCTCCGCGCTCGAAACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAATTCGAAGTGCACATGATAATATTGATAGGACTCTTAAAGCAGCAGAGGGAATTTTGTCACAATTCGACCAAACACGAATGGCGGAGGCTAAAATACTACGAGGGCCACACGAGGATCTAGAAAGTTATTTAGGAGCAATTGATCAGTTAAGAGCAAATGTTCGTTTCTTTAACAGCAAAAAGAGTTTTAAAAGCAGTGAAGGTATCATCAACCATGCCAACAGCTTGCTTGCCAAAGCTATCTCAAAGCTAGAAGACGAATTCAAACATCTTTTAACAAATTATAGTAAACCTGTGGAACCCGATCGACTTTTTGAGTGCTTACCAAACTCTCTAAGGCCATCAAATTCTGGAAAGCAAAGTGAAAGTGGTGGAAAAAACCCTCCTGGAAAAAAAGGTTCAGAAGCGGTCACTTTTGCACTTCCAACTCTTATTCCACCCAGAGTTGTACCTTTACTACATGATTTAGCACAACAAATGGTTCAAGCTGGACATCAACAACAACTCTTTCGAATCTATAGAGACACTCGTGCTACAATCTTGGAACAAAGTCTTAGGAAGTTAGGTGTAGAAAGGCTAAGTAAGGATGATGTTCAAAAAATGCAGTGGGAAGTTTTGGAGGCAAAGATTGGGAACTGGATTCATTACATGAGGATTGCTGTTAAATTATTGATTTCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCTTTGAAAACTCAATGTTTTGCTGAAGTCACGGCTAGTAGTGTTGCTATGCTTCTTAGTTTTGGAGAGGCTATTGCAAAAAGTAAGAGGTCTCCTGAGAAATTATTTGTTCTTCTAGACATGTATGAGATCATGAGAGAACTTCAACCAGAGATTGAGATACTTTTTGAAAGTAAAGCATGCACTGAAATGCGGGAAGCTGCAATAAATTTGGCAAAAAGATTGGCTCAAACAGCTCAAGAAACCTTTGTTGACTTTGAGGAAGCTGTCGAAAAGGATGCCACTAAGACTACTGTTATGGATGGAACTGTCCACCCTTTAACTAGCTATGTTATCAATTATGTGAAGTTTCTTTATGATTATCAATCAACCCTCAAACAACTTTTTCATGAGTTTGATCCCAACGATCCAGAAGGACAATTAGCAATTATTACAACAAGGATCATGCAGGCTCTCCAAAGTAACTTGGATGGAAAATCAAAACAATATAAAGATCCAGCCTTGACCCAATTATTTCTTATGAACAATATCCATTACATAGTGAGATCTGTGAGAAGGTCAGAGGCAAAAGACATGTTAGGAGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAACATGCAAACCAATATAAAAGGATCTCTTGGGCAAAGATTTTACAATGCCTCACAATCCAAGGAGGGGATAGTAATAGTGGAGTCTCAAGGACAGTTGTTAAAGATAGATTCAAGACTTTTAATGATCAAATCGAAGAGCTTCATCAAAGACAATCTCAATGGACTGTTCCAGATAGTGAATTGCGTGAATCTCTTAGATTGGCCGTTGCTGAAGTTCTATTACCTGCATATAGATCTTTCCTTAAACGTTTTGGGCCCATGATTGAGAATGGCAAAAATCCTCATAAGTACATTGTATACTCTCCTGAACATCTCGAGCAAATGTTGGGTGAATTTTTTGAAAGCAAGATATGGGGTGACCAGAAGCGGTAA 1887 0.3937 MEIPEAMDALVQRAAFVKESLHKSQTITDNMVSILGSFDHRLSALETAMRPTQIKTHSIRSAHDNIDRTLKAAEGILSQFDQTRMAEAKILRGPHEDLESYLGAIDQLRANVRFFNSKKSFKSSEGIINHANSLLAKAISKLEDEFKHLLTNYSKPVEPDRLFECLPNSLRPSNSGKQSESGGKNPPGKKGSEAVTFALPTLIPPRVVPLLHDLAQQMVQAGHQQQLFRIYRDTRATILEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYMRIAVKLLISGEKKICDQIFDGVDSLKTQCFAEVTASSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEIEILFESKACTEMREAAINLAKRLAQTAQETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKQLFHEFDPNDPEGQLAIITTRIMQALQSNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTIQGGDSNSGVSRTVVKDRFKTFNDQIEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPHKYIVYSPEHLEQMLGEFFESKIWGDQKR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00192 628 Gene3D Exocyst complex component Exo70 75 628 - -
Cca09g00192 628 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 623 - -
Cca09g00192 628 MobiDBLite consensus disorder prediction 168 182 - -
Cca09g00192 628 Pfam Exo70 exocyst complex subunit 270 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca09g00192 628 MobiDBLite consensus disorder prediction 165 191 - -
Cca09g00192 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 623 IPR004140 GO:0000145|GO:0006887
Cca09g00192 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00192 Cca-Chr9 3900193 3911054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00192 1 628 EXO70 exocyst subunit family AT5G52340 77.532 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00192 K07195 - gmx:100779774 1157.9