Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00157 ATGGAGAACTCAGAGAAGGTGGTGGCTGTGATCATGGTGGGTGGACCCACTAAAGGGACCAGATTTCGGCCTCTTTCCTTCAATACTCCGAAACCCCTTTTCCCTGTGGCTGGCCAGCCAATGGTTCACCATCCTATTTCTGCTTGTAAAAGGATACCCAATTTGGCTCAAATATATCTTATTGGATTCTATGAGGAGCGAGAATTTGCTCTATATGTCTCTTCAATCTCAAATGAGCTGAAATTACCAGTAAGATATTTGAAGGAGGATAAACCGCATGGTTCAGCGGGTGGTCTTTACTACTACAGAGATATTATAATGGAAGATAGCCCGTCACATATCTTTCTGTTAAATTGTGATGTTTGCTGCAGTTTTCCACTACCATCGATGCTTGATGCGCATAAAAGATATGGTGGGATGGGGACAATGTTAGTAATCAAGGTTTCAGCTGAATCTGCTAGCCAATTCGGTGAGTTGGTTGCTGATCCAACCACTAATGAGTTGCTGCATTATACCGAGAAACCTGAAACATTTGTCAGTGATTTGATAAATTGCGGTGTCTACATTTTCACCCCTGATATTTTTACTGCCATCCATGATGTATATACTAATCGAGAAGGCAGAGCTAATTTACGTCGTTACTCCAGCTTTGAAGCACTCCAATCTGCTACAAGGACTATTCATGTAGATTTTGTAAGACTGGATCAAGATATATTATCTCCTCTTGCTGGAAAGAAGCAGCTTTATACATATGAGACAATGGATTTCTGGGAGCAAATTAAAACTCCAGGAATGTCATTGAAATGCTCAGAACTGTATCTTGCTCAATTCCGGCATACTTCACCCTATCTTTTGGCCAGTGGAGATGGTAAAAAGAATGCTACAATTGTTGGTGATGTGTATATTCACCCATCAGCAAAAGTTCATCCGTCCGCGAAGATTGGTCCCAATGTTTCTATCTCAGCAAATGTTCGTGTAGGTGCTGGCGTCAGGTTAAGCGGCTGTATCATCTTGGATGATGTTGAAATTATGGAAAATGCTGTAGTCAAAAACTCAATTGTTGGATGGAAGTCATCTCTTGGAAGATGGTCGCTTGTGCAGGCTGAAGGTGACTACAACGCAAGGCTTGGCACAACCATTCTAGGTGAAGCTGTAACGGTTGAAGATGAAGTAGTAGTGACCAGCTGCATTGTTCTTCCCAACAAGACCCTTAATGTCGGTGTGCAAGAAGAAATCATTTTATAA 1245 0.4177 MENSEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPVAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYYRDIIMEDSPSHIFLLNCDVCCSFPLPSMLDAHKRYGGMGTMLVIKVSAESASQFGELVADPTTNELLHYTEKPETFVSDLINCGVYIFTPDIFTAIHDVYTNREGRANLRRYSSFEALQSATRTIHVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSELYLAQFRHTSPYLLASGDGKKNATIVGDVYIHPSAKVHPSAKIGPNVSISANVRVGAGVRLSGCIILDDVEIMENAVVKNSIVGWKSSLGRWSLVQAEGDYNARLGTTILGEAVTVEDEVVVTSCIVLPNKTLNVGVQEEIIL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00157 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Cca09g00157 414 Gene3D Hexapeptide repeat proteins 286 410 - -
Cca09g00157 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 277 IPR029044 -
Cca09g00157 414 Pfam Nucleotidyl transferase 9 222 IPR005835 GO:0009058|GO:0016779
Cca09g00157 414 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 5 414 - -
Cca09g00157 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Cca09g00157 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 5 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00157 Cca-Chr9 2974988 2981167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00157 19 354 Eukaryotic Initiation Factors Gene Family AT2G34970 21.628 1.30e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00157 K00966 - gmx:100782402 755.362