Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00156 ATGGAAACTTCCATGGTCATAGGAGATGGGATTCTTACTCCATCAATTTCAGTCCTTTCTGCGGTGAGTGGGATCAGTACATCGTTGGGTCAAGGAGCTGTTGTGGGGATCACTATAGCAATCTTGGTAGTCCTATTTTGTATGCAACGATTCGGTACTTATAAAGTGGGATTCACATTCGCTCCAATCATTTTGTTGTGGTTTTTATTCATCGGTGGAATTGGCCTTTACAATTTATTCAAATATGACATTGGAGTATTACGTGCTTTTAATCCAAAATACATATATGATTACTTCAAACGGAACGGCAAGGACGGATGGATATTGCTTGGAGGATTCTTTTTGTGCATAACAGGATCGGAGGCCATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCAAATTAGCTTTTCTTGCATTACGTGTCCTGCAATAGTGGTTGCATACATAGGGCAAGCAGCATTTCTACGGAAGTTTCCGGAGAAAGTGGATAATACTTTCTATGATAGTATACCGGATCCCTGA 531 0.4068 METSMVIGDGILTPSISVLSAVSGISTSLGQGAVVGITIAILVVLFCMQRFGTYKVGFTFAPIILLWFLFIGGIGLYNLFKYDIGVLRAFNPKYIYDYFKRNGKDGWILLGGFFLCITGSEAMFADLGHFNVRAIQISFSCITCPAIVVAYIGQAAFLRKFPEKVDNTFYDSIPDP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00156 176 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 172 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g00156 176 Pfam K+ potassium transporter 3 175 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca09g00156 176 PANTHER POTASSIUM TRANSPORTER 5 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00156 Cca-Chr9 2973289 2974537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00156 1 176 Inorganic Solute Cotransporters AT4G13420 72.727 1.02e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00156 K03549 - gmx:100786294 315.849