Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00148 ATGGATATTGTTCTAAATTACCTAAATGCAACTGCCATTGGACTtctttctctattcctcttcctcttctatttgtttttGTATCATCCCTTCAAATTTGGTCATAATAAAGAGGCTCCCACGGTTGCAGGGGCATGGCCAATACTTGGCCACCTCCCGTTGTTGAGTGGCTCACAATCACCACATAGAACCTTGGGTGCTTTAGCTGACAAGTATGGACCCATATTCACTATCAAGCTTGGTGTCAAAGACGCTTTAATAATAAGCAATTGGGAAGTGGCTAAGGAATGCTTCACCAAAAACGACGCCGTCGTTTCCTCCCGCCCTAAGCTTGTTGCCGTTGAGCACTTAGGCTACAACCAAGCCATGTTTGCCGTAGCACCCTATGGTCCTTATTGGCGCGAAATACGAAAGATTATAACATCAGAGATCCTCTCCAATCGCCGAGTAGAGCAACTACAACATGTTCGTGTGACAGAAATTCGAAATTCGATTAAGGAGCTCCTTGATGTTTGGAGTAGCACAAAGAGCGAGTCTGGTTATGCACTGGTGGAGCTGAAGCAATGGTTTTCTCATTTGGTATTCAACATTGTTTTTCAAATGACCGTTGGAAAACGATATTTTGGTGCTGCAAGTGTGGATGATGAGAAGGCACAGAGATGTGTAAAAGCTGTAAAAGAGCTCTTGCGTCTGTTTGGGGTGTTTACAGTGGGAGATGCTATTCCTTATTTGAGATGGTTTGATTTTGGTGGCCATGAAAAGGCCATGAAAGAAATTGGCAAGGAATTTGATGGTATATTAAGTGAGTGGTTAGAGGAGCATCGACAAAAAAGGGCTTTGGGTGAGAACGTTCAAGACTTCATGGATGTGATGATTTCCTTGCTTGATGGGAAGACAATTGATGGGATTGACGGCGATACCATGATCAAATCCACTGTCCAGGCAATACTATCGGCTGGAACAGATACAATTAGTACTGTTCTTATATGGTCAATATGCTTGATATTGAAAAATCCTCTTATATTAGAAAAACTTATAGCAGAACTTGACATTCAAGTTGGAAAAAAGAGATGCATATGTGAGTCTGATTTAAGTAAGTTAACATACTTTCAAGCCACAGTCAAAGAAACTTTAAGATTGTATCCTCCTGCTCCTCTCTCATCACCTCGTGAATTCACTGAAGATTGCACATTAAGTGGTTTTAATGTTAAAAAGGGAACTCGTCTGATTACAAATCTTTGGAAAATCAACACGGATCTTAATGTTTGGTCAGATCCATTAGAGTTCAAACCAGAACGGTTTCTTACTACTTATAAAGATATTGATATGAAGGGTCAACATTTTGAGCTATTACCATTCGGAAGTGGTAGGAGAATTTGTCCTGGAATAACCTTTGGCCTTCAAATTGTTCAATTTAGTCTTGCAATTCTTTTGCATTCGTTTGAGATCTTAGAATCACCAACAGAACCTATTGATATGGCTGAAACCTTTGGAACAACCTCCAATAAAGCCAATCCACTTAAGATTCTTATTAAACCACGATTGTCTCCTAATTGTTACGAGAGCTTGTGA 1572 0.3938 MDIVLNYLNATAIGLLSLFLFLFYLFLYHPFKFGHNKEAPTVAGAWPILGHLPLLSGSQSPHRTLGALADKYGPIFTIKLGVKDALIISNWEVAKECFTKNDAVVSSRPKLVAVEHLGYNQAMFAVAPYGPYWREIRKIITSEILSNRRVEQLQHVRVTEIRNSIKELLDVWSSTKSESGYALVELKQWFSHLVFNIVFQMTVGKRYFGAASVDDEKAQRCVKAVKELLRLFGVFTVGDAIPYLRWFDFGGHEKAMKEIGKEFDGILSEWLEEHRQKRALGENVQDFMDVMISLLDGKTIDGIDGDTMIKSTVQAILSAGTDTISTVLIWSICLILKNPLILEKLIAELDIQVGKKRCICESDLSKLTYFQATVKETLRLYPPAPLSSPREFTEDCTLSGFNVKKGTRLITNLWKINTDLNVWSDPLEFKPERFLTTYKDIDMKGQHFELLPFGSGRRICPGITFGLQIVQFSLAILLHSFEILESPTEPIDMAETFGTTSNKANPLKILIKPRLSPNCYESL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00148 523 PANTHER CYTOCHROME P450 82A2 1 521 - -
Cca09g00148 523 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
Cca09g00148 523 Gene3D Cytochrome P450 34 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 SUPERFAMILY Cytochrome P450 45 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Cca09g00148 523 Pfam Cytochrome P450 43 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca09g00148 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00148 Cca-Chr9 2722622 2727507 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00148 15 520 Cytochrome P450 AT4G31940 46.346 3.85e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00148 - - gmx:100805047 776.163