Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00141 ATGCGGCCAATCCATTTGGAGCAAGATGCCAGCTCACAGCAGACACCCCATGACACATCCCGTGATCCGTCTCCCACTCCCACACCATCGCGCGTGCCAGGCACTCTCCCATCTTCACCTTCTTCTTATATGtcacaactcacaactcacacttctcaccttcactcactcactctctcTTCCTCTTCCACAATGTCACCACTCCTCCTCACACTGCTCTTCCTCTCCTGCGCCCACGCGCGTCTCACACTCGACTTCTATAAGGACACGTGTCCGCAGTTCAGCCAGATCATCCGGGACACCGTCACCGCCAAGCAGATCGCCAGCCCCACCACCGCCGCCGCCACGCTCCGCCTCTTCCTCCACGACTGCCTCCTCCCCAACGGCTGCGACGCCTCCATCCTCCTCTCCACCACGCGCCTGGGCCCCCCCGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTGGTCCGCGCCAAGACCGCCCTCGAGCTGGCCTGCCCCAACACCGTGTCCTGCGCCGACATCCTCTCCGCCGCCACCCGCGACCTCCTGACCATGCTGGGCGGCCCCTTCTACCCCGTGTTCCTCGGGCGGCGCGACGGCCGctcctccctggcctcctccgtccccctccacctccccaccccctccATGCCCATCTCCGAAATCCTCCAAATCTTCACCAGCCGCGGGTTCTCCGTCGAGGAATTCGTGGCCCTCTCCGGGGCCCACACCGTTGGTTTCTCCCACTGCTCCGAGTTCATCTCCAACGTctcctcctcctcctcctACAACCCTCGCTTCGCTCAGGCTCTCCACAATGCTTGCGCCCGTTACCCTTCCGACCCCACTTTATCCGTCTTCAACGATGTCATCACCCCCAACAAGTTCGACAACGTTTACTTCCAGAACCTTCCCAAGGGTTTGGGCGTCTTGAAATCCGACCACGGTTTGTATAGCCACCCCCTTACCCGACCCTTCGTCCAAGCCTTTGCCAAGGACCAAGATGCTTTCTTTAAGGTCTTTGCTACCTCCATGCAGAAGCTTAGTCTCTTGGGTGTGCAGACAGGGAGGAAGGGCCAGATCAGACGCAGCTGCAGTTGTTGCCGTTTTTAA 1140 0.5518 MRPIHLEQDASSQQTPHDTSRDPSPTPTPSRVPGTLPSSPSSYMSQLTTHTSHLHSLTLSSSSTMSPLLLTLLFLSCAHARLTLDFYKDTCPQFSQIIRDTVTAKQIASPTTAAATLRLFLHDCLLPNGCDASILLSTTRLGPPAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSAATRDLLTMLGGPFYPVFLGRRDGRSSLASSVPLHLPTPSMPISEILQIFTSRGFSVEEFVALSGAHTVGFSHCSEFISNVSSSSSYNPRFAQALHNACARYPSDPTLSVFNDVITPNKFDNVYFQNLPKGLGVLKSDHGLYSHPLTRPFVQAFAKDQDAFFKVFATSMQKLSLLGVQTGRKGQIRRSCSCCRF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00141 379 Gene3D - 85 375 - -
Cca09g00141 379 MobiDBLite consensus disorder prediction 1 47 - -
Cca09g00141 379 CDD secretory_peroxidase 82 375 IPR033905 GO:0004601|GO:0042744
Cca09g00141 379 SUPERFAMILY Heme-dependent peroxidases 82 376 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 ProSiteProfiles Plant heme peroxidase family profile. 81 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 Gene3D Peroxidase, domain 2 222 357 - -
Cca09g00141 379 PRINTS Haem peroxidase superfamily signature 196 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Haem peroxidase superfamily signature 178 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Haem peroxidase superfamily signature 298 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 Pfam Peroxidase 101 342 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PANTHER PEROXIDASE 31 65 376 - -
Cca09g00141 379 MobiDBLite consensus disorder prediction 7 21 - -
Cca09g00141 379 PRINTS Plant peroxidase signature 177 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 91 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 196 211 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 352 365 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 158 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 312 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 243 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 296 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PRINTS Plant peroxidase signature 115 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca09g00141 379 PANTHER - 65 376 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00141 Cca-Chr9 2564942 2567078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00141 78 374 Peroxidase AT3G28200 66.779 1.05e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00141 K00430 - gmx:100817030 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00141 09 2564942 2567078 Cca09g00141 09 2564942 2567078 ECH