Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00128 ATGGCAACACAATGGTCTCTTTACAGGGATGTTCTGCCAGTTGTGGTGATTATAGGCAATGAATGCAATGACATGGGATTGCTCACACTCTTCAAGATAGCCACACTCCAAGGGATGAACAACCATGTCTTTGTGGCCTATGCTTATGCTATTGGCACCACTATACTCCTTCCTGTCACTTTTTTCCACACAAGAGTGGTTCCTCCACTTAGTTTCTCCATAATATCCAAGATAGTCCTTCTTGGGGTCATAGGAAGTTCATCTCAGATACTTGGTTATGCTGGAATTAGCTATAGTTCTCCAACACTCGCTTCATCAATTGGCAATTTGGTGCCTGCTTTCACTTTCATACTTGCTGTAATTTGCAGGATGGAAAAGTTAGCTGCCAAAAGTAGAAGTAGCCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGAGCATTTGTGTTGACATTGTACAAAGGCATACCAATCATAAACGCTCACACACATCTTTCCTTACTACTTCAACGTCCAATTATCTTTCTTAGATCAGAGGATGCAAGTTGGGCCATTGCTGCCATTCTGCTCATAGGTGACTACTTTCTAACTTCAGTATGGTACATTTTACAGGTGGATATCTTGAAAGTGTTTCCAGATGAACTAACTCTAGTTTTCTTTTACAATGTGACTGCCACCATATTATCTACAGCAGTAGGTTTCTTTGTAGTGCCAAATCCAAGGGCTTGGAAAGTAGGACTAGATATTTCTCTGCTATCCATTGTTTGCTCTGGGATATTTGGAAAGTTAATGAGCAATGTAGTTTATGCCTGGGCACTGCATTTAAAGGGGGCAGTCTATGTAACATCCTTCAAGCCACTCCAAATTGTTATTGCTGTTGCAATGGGTGTTATGTTCCTTGATGATACTCTTTACATTGGAAGTGTAGTTGGAGCCACAATAATATCAATTGGCCTTTATACTGTACTATGGGGAAAGGCAACAGAAGAGATAGAGGAAGATGTTGGTAGCCTTGGATCACCAACTGCTGAGAATGCTCCTCTCTTGCAAAGCTACATAACTGAAACATCAGAAAAGAATAGTGGTTCCTCCACTCAGTTTTTCCATCCTATCCAAAATTGCTCTTCTTGGAGTCATAGGGTAAGTAAAGGCCCCACAATTGCTAAGGTTTTAAGGCCTTTTAGAATTTGTTTTCTCTTACCCACTTTGTTGTTTTGGATTTTGATGGGCATGAATTACAGGTGTTCATCTCAGATTCTGGGCTATGCTGGCATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCTTTCACATTCATGCTTGCTATTATTTGCAGGATGGAAAAGATAGCTGTAAGACGTAGAACTACCCAGGCTAAGATTTTGGGCAGCATTATATCAATAGCAGGTGCATTTATTGTGACATTTTACAAAGGCCAATCGATCATCATAGCTGATAATTCCCCTTCCATTCAACTTCCACACTCAAATGGCATTCTTACTTCAGTGGATAGAAATTGGGTCATTGGTGGCATTCTGCTTACAGCTTGCAATGTTCTACTTACTGTATGGTTCGTTTTTCAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTCTTCTTTTACAACTTGTGTGCAGCCATTGTAGCTTCAATTGTAGGTTTATTAGGAGAGAAAAATTCAAGTGCGTGGAAAATAAGACTAGATATATCACTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCCTGAGTAGTGCAATTTATGCCTGGGGAATACACTTAAAGGGGCCTGTGTATGTAGCAATGTTCAAACCACTCTCAATTGTTATTGCGGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTACATGTTGGAAGTATAATTGGTGCCACAGTAATATCAATTGGATTTTACACTGTGATGTGGGGCAAAGCAACTGAACTGAAGGAAGAGGAGATCGAGGAAGATGTTGTGTATAGAAGACAGAATTGCCAACTACAAAGAAATGAGAATGTTCTTGTAAAGGACACTGTATGA 2076 0.4022 MATQWSLYRDVLPVVVIIGNECNDMGLLTLFKIATLQGMNNHVFVAYAYAIGTTILLPVTFFHTRVVPPLSFSIISKIVLLGVIGSSSQILGYAGISYSSPTLASSIGNLVPAFTFILAVICRMEKLAAKSRSSQAKVMGSIISIAGAFVLTLYKGIPIINAHTHLSLLLQRPIIFLRSEDASWAIAAILLIGDYFLTSVWYILQVDILKVFPDELTLVFFYNVTATILSTAVGFFVVPNPRAWKVGLDISLLSIVCSGIFGKLMSNVVYAWALHLKGAVYVTSFKPLQIVIAVAMGVMFLDDTLYIGSVVGATIISIGLYTVLWGKATEEIEEDVGSLGSPTAENAPLLQSYITETSEKNSGSSTQFFHPIQNCSSWSHRVSKGPTIAKVLRPFRICFLLPTLLFWILMGMNYRCSSQILGYAGISYSSPTLSSAISNLTPAFTFMLAIICRMEKIAVRRRTTQAKILGSIISIAGAFIVTFYKGQSIIIADNSPSIQLPHSNGILTSVDRNWVIGGILLTACNVLLTVWFVFQVEILKEFPDELTMVFFYNLCAAIVASIVGLLGEKNSSAWKIRLDISLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLHVGSIIGATVISIGFYTVMWGKATELKEEEIEEDVVYRRQNCQLQRNENVLVKDTV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00128 691 Pfam EamA-like transporter family 30 152 IPR000620 GO:0016020|GO:0016021
Cca09g00128 691 Pfam EamA-like transporter family 518 654 IPR000620 GO:0016020|GO:0016021
Cca09g00128 691 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 155 - -
Cca09g00128 691 PANTHER WAT1-RELATED PROTEIN 404 674 - -
Cca09g00128 691 PANTHER WAT1-RELATED PROTEIN 7 350 - -
Cca09g00128 691 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 327 - -
Cca09g00128 691 SUPERFAMILY Multidrug resistance efflux transporter EmrE 558 657 - -
Cca09g00128 691 PANTHER WAT1-RELATED PROTEIN 404 674 IPR030184 GO:0016021|GO:0022857
Cca09g00128 691 PANTHER WAT1-RELATED PROTEIN 7 350 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00128 Cca-Chr9 2283116 2315359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00128 416 676 Nodulin-like Gene Family AT3G28050 48.855 1.72e-82 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00128 - - mtr:MTR_6g007753 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00128 09 2283116 2315359 Cca09g00128 09 2283116 2315359 ECH