Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00127 ATGGTCACCCCTTCCCCCACATTTGTCTCCAGATCAAGAGTGGTTCCTCCACTTAGTTTCTCCATAATATCCAAAATGATTCTTCTTGGGGTGATAGGAACTTTATCTCAGATAATGGGATATGTTGGCATTGGCTACAGTTCTCCAACACTTTCTTCATCAATTGCCAATCTGGGGCCTGCTTTCGCTTTCATGCTTGCAGTCATTTTCAGCTTTATTTGTGGTGCCAAACGCAAGTGCTTGGAAAATAGGATTAGAGATTTCATTAGTCTTCATTGTTTGGGAACATTTCAAGAAGTTATGGGCAATATAGTTTCCACCTGCGTACTACGCTTAAAGGACCCTGTCTATGTAACATCATTCACGCCATTCACTGTTGTTATTGTTGTTGCCATGGGTATTATGTTCCTTGGTGATACTTTTCACCTAGGAAGTTACAATAATATCAATTGGCTTTTATGCTGTGTTGTGGAGCAAAGCAACAGAGGAGACAGAGGAAGGTGCTGGTAG 510 0.4137 MVTPSPTFVSRSRVVPPLSFSIISKMILLGVIGTLSQIMGYVGIGYSSPTLSSSIANLGPAFAFMLAVIFSFICGAKRKCLENRIRDFISLHCLGTFQEVMGNIVSTCVLRLKDPVYVTSFTPFTVVIVVAMGIMFLGDTFHLGSYNNINWLLCCVVEQSNRGDRGRCW 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00127 169 PANTHER WAT1-RELATED PROTEIN 88 145 IPR030184 GO:0016021|GO:0022857
Cca09g00127 169 PANTHER WAT1-RELATED PROTEIN 88 145 - -
Cca09g00127 169 PANTHER WAT1-RELATED PROTEIN 8 71 IPR030184 GO:0016021|GO:0022857
Cca09g00127 169 PANTHER WAT1-RELATED PROTEIN 8 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00127 Cca-Chr9 2273912 2278310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00127 11 70 Nodulin-like Gene Family AT3G28050 65.000 2.01e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00127 - - nau:109218179 98.9821