Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g00113 ATGAAGAAGAGTGAGAGTGGGGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGGGCATGGACCATGGagaagaacaaggagaaggaagaagatgaggttgaagggaggtcaacaagaagcagacaagaaTGGGAGATTGACCCTTCCAAACTCATAATCAAGACTGTCATTGCTCGTGGTACTTTTGGCACTGTTCATCGTGGAATTTATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAGGGCCATCGGTCGGAGGCTGAAATAGCCTCTTTGAGAGCGGCTTTTACTCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTATTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCCGGAGGTGCGCTGAAGTCTTATCTCATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTCCAATCTTTATGCCTAA 603 0.4113 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEDEVEGRSTRSRQEWEIDPSKLIIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGSNLYA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g00113 200 SUPERFAMILY Protein kinase-like (PK-like) 49 195 IPR011009 -
Cca09g00113 200 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 196 - -
Cca09g00113 200 ProSiteProfiles Protein kinase domain profile. 63 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca09g00113 200 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
Cca09g00113 200 Pfam Protein tyrosine and serine/threonine kinase 65 196 IPR001245 GO:0004672|GO:0006468
Cca09g00113 200 MobiDBLite consensus disorder prediction 31 53 - -
Cca09g00113 200 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g00113 Cca-Chr9 1964261 1969092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca09g00113 2 195 MAP Kinase Kinase Kinase AT3G01490 70.588 6.17e-115 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Cca09g00113 PK_Tyr_Ser-Thr 3.3e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca09g00113 - - gmx:100796762 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g00113 09 1964261 1969092 Cca09g00113 09 1964261 1969092 ECH